Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 6
- plastid 1
- vacuole 3
- plasma membrane 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012439.1-P | Field mustard | extracellular | 91.89 | 91.89 |
| CDY40267 | Canola | extracellular | 91.89 | 91.89 |
| CDY20583 | Canola | extracellular | 91.44 | 91.44 |
| KRH74871 | Soybean | endoplasmic reticulum | 65.32 | 64.16 |
| KRH70737 | Soybean | extracellular | 64.86 | 63.72 |
| AT1G14220.1 | Thale cress | extracellular | 64.86 | 63.16 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 57.21 | 57.21 |
| AT2G02990.1 | Thale cress | extracellular | 58.56 | 56.52 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 57.66 | 56.39 |
| Solyc05g007940.2.1 | Tomato | extracellular | 58.56 | 54.85 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 56.76 | 47.73 |
| AT1G14210.1 | Thale cress | extracellular | 47.75 | 42.91 |
| AT2G39780.1 | Thale cress | extracellular | 31.98 | 27.41 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EntrezGene:839225 | UniProt:A0A178W614 | ProteinID:AAD14489.1 | ProteinID:AAF87036.1 |
| ProteinID:AEE30746.1 | ArrayExpress:AT1G26820 | EnsemblPlantsGene:AT1G26820 | RefSeq:AT1G26820 | TAIR:AT1G26820 | RefSeq:AT1G26820-TAIR-G |
| EnsemblPlants:AT1G26820.1 | TAIR:AT1G26820.1 | EMBL:AY063844 | EMBL:AY088821 | EMBL:AY117288 | Unigene:At.10793 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0033897 | GO:GO:0090305 | GO:GO:0090502 | InterPro:IPR036430 | RefSeq:NP_564264.1 | ProteinID:OAP13907.1 |
| UniProt:P42815 | PFAM:PF00445 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00530 |
| ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF19 | Symbol:RNS3 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | EMBL:U05207 |
| UniParc:UPI000000145B | : | : | : | : | : |
Description
RNS3Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:P42815]
Coordinates
chr1:-:9292446..9293862
Molecular Weight (calculated)
25627.2 Da
IEP (calculated)
6.073
GRAVY (calculated)
-0.486
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.