Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 6
- plastid 1
- vacuole 4
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33763 | Canola | extracellular | 85.83 | 86.89 |
| Bra026847.1-P | Field mustard | extracellular | 84.62 | 85.66 |
| CDX81620 | Canola | extracellular | 74.09 | 83.94 |
| AT1G14220.1 | Thale cress | extracellular | 48.58 | 52.63 |
| VIT_01s0010g01250.t01 | Wine grape | cytosol, nucleus, plastid | 26.72 | 49.62 |
| VIT_01s0010g00450.t01 | Wine grape | extracellular | 18.62 | 48.94 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 44.13 | 48.02 |
| AT2G02990.1 | Thale cress | extracellular | 44.53 | 47.83 |
| AT1G26820.1 | Thale cress | extracellular | 42.91 | 47.75 |
| VIT_01s0026g02520.t01 | Wine grape | extracellular | 43.32 | 47.35 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 42.51 | 47.3 |
| KRG89632 | Soybean | extracellular | 43.72 | 45.38 |
| PGSC0003DMT400007421 | Potato | cytosol | 38.87 | 44.04 |
| Solyc04g005640.2.1 | Tomato | extracellular | 42.11 | 43.33 |
| Solyc05g013210.2.1 | Tomato | cytosol | 21.46 | 42.74 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 42.11 | 39.39 |
| PGSC0003DMT400007343 | Potato | extracellular, mitochondrion, nucleus | 15.79 | 36.45 |
| AT2G39780.1 | Thale cress | extracellular | 26.32 | 25.1 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EntrezGene:837982 | UniProt:A0A178WND2 | ProteinID:AEE29123.1 | ArrayExpress:AT1G14210 |
| EnsemblPlantsGene:AT1G14210 | RefSeq:AT1G14210 | TAIR:AT1G14210 | RefSeq:AT1G14210-TAIR-G | EnsemblPlants:AT1G14210.1 | TAIR:AT1G14210.1 |
| Unigene:At.22450 | UniProt:F4HUG9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 |
| InterPro:IPR036430 | RefSeq:NP_563940.1 | ProteinID:OAP19421.1 | PFAM:PF00445 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00530 | ScanProsite:PS00531 |
| PANTHER:PTHR11240 | PANTHER:PTHR11240:SF19 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 |
| InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI000004824A | SEG:seg | : |
Description
Ribonuclease T2 family protein [Source:UniProtKB/TrEMBL;Acc:F4HUG9]
Coordinates
chr1:-:4856778..4857975
Molecular Weight (calculated)
28187.5 Da
IEP (calculated)
6.228
GRAVY (calculated)
-0.232
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGIIIVSLL ILQSLVVSSS QTEPDFNFFY WVNYWPGAIC DSQKGCCPPT KGNTASDFII HGLWPQFNNG TWPAFCDQTN LFDISKISDL VCQMEKKWTE
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.