Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g02520.t01 | Wine grape | extracellular | 100.0 | 41.59 |
| Solyc05g007950.2.1 | Tomato | extracellular | 72.34 | 29.57 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 65.96 | 27.93 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 62.77 | 25.99 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 61.7 | 21.97 |
| KRG89632 | Soybean | extracellular | 54.26 | 21.43 |
| CDX81620 | Canola | extracellular | 44.68 | 19.27 |
| AT1G14210.1 | Thale cress | extracellular | 48.94 | 18.62 |
| CDY33763 | Canola | extracellular | 45.74 | 17.62 |
| PGSC0003DMT400007421 | Potato | cytosol | 40.43 | 17.43 |
| Bra026847.1-P | Field mustard | extracellular | 44.68 | 17.21 |
| PGSC0003DMT400007343 | Potato | extracellular, mitochondrion, nucleus | 4.26 | 3.74 |
| VIT_01s0010g01250.t01 | Wine grape | cytosol, nucleus, plastid | 1.06 | 0.75 |
| VIT_00s1339g00010.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | ProteinID:CBI27389 | ProteinID:CBI27389.3 | UniProt:D7TA67 | EMBL:FN595754 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0033897 |
| GO:GO:0090502 | InterPro:IPR036430 | PFAM:PF00445 | ScanProsite:PS00530 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF19 |
| InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI0001BE2942 |
| ArrayExpress:VIT_01s0010g00450 | EnsemblPlantsGene:VIT_01s0010g00450 | EnsemblPlants:VIT_01s0010g00450.t01 | RefSeq:XP_003631335 | RefSeq:XP_003631335.1 | : |
Description
No Description!
Coordinates
chr1:-:15204771..15212172
Molecular Weight (calculated)
10819.6 Da
IEP (calculated)
4.214
GRAVY (calculated)
-0.373
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MKSNQSFFIK LLIIQCLTVV CFSQDFDFFY LVQQWPGSYC DSKQSCCYPT TGKPDADFGI HGLWPNYRDG SYPSNCDSNN PYDESEISDL IRSM
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Arabidopsis Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.