Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- plastid 2
- cytosol 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g02520.t01 | Wine grape | extracellular | 79.7 | 46.9 |
| Solyc05g007950.2.1 | Tomato | extracellular | 67.67 | 39.13 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 64.66 | 37.89 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 61.65 | 36.94 |
| PGSC0003DMT400007421 | Potato | cytosol | 54.89 | 33.49 |
| PGSC0003DMT400007343 | Potato | extracellular, mitochondrion, nucleus | 26.32 | 32.71 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 64.66 | 32.58 |
| KRG89632 | Soybean | extracellular | 51.13 | 28.57 |
| AT1G14210.1 | Thale cress | extracellular | 49.62 | 26.72 |
| Bra026847.1-P | Field mustard | extracellular | 48.12 | 26.23 |
| CDY33763 | Canola | extracellular | 48.12 | 26.23 |
| CDX81620 | Canola | extracellular | 34.59 | 21.1 |
| VIT_00s1339g00010.t01 | Wine grape | cytosol | 15.04 | 19.23 |
| VIT_01s0010g00450.t01 | Wine grape | extracellular | 0.75 | 1.06 |
Protein Annotations
| EntrezGene:100266770 | wikigene:100266770 | Gene3D:3.90.730.10 | MapMan:35.1 | ProteinID:CBI27451 | ProteinID:CBI27451.3 |
| UniProt:D7TAC8 | EMBL:FN595754 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 | EntrezGene:LOC100266770 | wikigene:LOC100266770 |
| PFAM:PF00445 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF35 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| InterPro:RNase_T2_His_AS_2 | SUPFAM:SSF55895 | UniParc:UPI00015C9ACC | ArrayExpress:VIT_01s0010g01250 | EnsemblPlantsGene:VIT_01s0010g01250 | EnsemblPlants:VIT_01s0010g01250.t01 |
| RefSeq:XP_002271022 | RefSeq:XP_002271022.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:17127121..17127644
Molecular Weight (calculated)
14758.8 Da
IEP (calculated)
9.099
GRAVY (calculated)
-0.383
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNNWPTLAC PSGNGTKFWA HEWNKHGTCS ESVLSQHQYF KAALGLKKDV DLLQILEKAG IKPNGESYCL KKTKKAIKDA VGFTPWIQCN VAPSGNRQLY
101: QVYVCVDTSG KNFIQCPVMP KGKCGSSIEF PSF
101: QVYVCVDTSG KNFIQCPVMP KGKCGSSIEF PSF
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Arabidopsis Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.