Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007343 | Potato | extracellular, mitochondrion, nucleus | 38.33 | 85.98 |
| Solyc05g013210.2.1 | Tomato | cytosol | 31.25 | 60.48 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 52.08 | 56.31 |
| Solyc05g007940.2.1 | Tomato | extracellular | 55.42 | 56.12 |
| Solyc05g007950.2.1 | Tomato | extracellular | 52.92 | 55.22 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 50.42 | 53.3 |
| KRG89632 | Soybean | extracellular | 47.08 | 47.48 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 50.42 | 45.83 |
| AT1G14210.1 | Thale cress | extracellular | 43.33 | 42.11 |
| Bra026847.1-P | Field mustard | extracellular | 41.25 | 40.57 |
| CDY33763 | Canola | extracellular | 41.25 | 40.57 |
| CDX81620 | Canola | extracellular | 35.0 | 38.53 |
| Solyc09g020110.2.1 | Tomato | plastid | 30.0 | 27.69 |
| Solyc06g082890.2.1 | Tomato | extracellular, plasma membrane | 30.42 | 26.45 |
| Solyc01g055200.1.1 | Tomato | extracellular | 22.92 | 24.89 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 | UniProt:K4BNH0 | PFAM:PF00445 |
| ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF35 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-TM | EnsemblPlantsGene:Solyc04g005640.2 |
| EnsemblPlants:Solyc04g005640.2.1 | TMHMM:TMhelix | UniParc:UPI00027663F1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:+:417342..420221
Molecular Weight (calculated)
27232.5 Da
IEP (calculated)
7.099
GRAVY (calculated)
-0.150
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFIYVILIN LIIFQFITFL HAQDFDFFYF AQQWNPASCD SKIKCCYPTN GKPAEDFGIH GLWPNYFNGS FPKSCNKNVR YDETQISDLI SSMQKNWPTL
101: SCPSNNGTRF WSHEWKKHGT CSLSMLDIHS YFQAALALKE KVNLLQILKN AGIQPNGGFY NLEAIKKAIE KGIGHTIGVE CNIDLNGNSQ LYEVYVCVDK
201: SGSNIIDCPI IPETKRCNEI VEFAVFGSRN ILDAGHAYSL
101: SCPSNNGTRF WSHEWKKHGT CSLSMLDIHS YFQAALALKE KVNLLQILKN AGIQPNGGFY NLEAIKKAIE KGIGHTIGVE CNIDLNGNSQ LYEVYVCVDK
201: SGSNIIDCPI IPETKRCNEI VEFAVFGSRN ILDAGHAYSL
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Arabidopsis Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.