Factsheet for GSMUA_Achr7P23750_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 6
extracellular 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60490	Canola	extracellular, plasma membrane, vacuole	47.33	55.47
AT2G39780.1	Thale cress	extracellular	46.67	54.05
Bra032671.1-P	Field mustard	extracellular	46.33	52.45
CDY39709	Canola	extracellular	46.33	52.45
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.0	52.17
KRH47963	Soybean	nucleus	46.67	51.85
TraesCS3A01G398300.1	Wheat	endoplasmic reticulum, extracellular	45.0	51.72
KRH06524	Soybean	extracellular	46.33	51.67
TraesCS3B01G430300.1	Wheat	unclear	46.0	49.46
Solyc09g020110.2.1	Tomato	plastid	42.67	49.23
TraesCS3D01G392300.1	Wheat	extracellular	45.33	48.4
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	48.33	47.23
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	43.33	47.1
Os01t0897300-01	Rice	extracellular	43.33	46.76
TraesCS3D01G392200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.33	45.94
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	43.33	45.94
TraesCS3B01G430200.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	43.0	45.58
TraesCS3A01G398200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.0	45.58
KXG33898	Sorghum	extracellular, plasma membrane	45.67	44.92
VIT_00s1339g00010.t01	Wine grape	cytosol	15.33	44.23
HORVU6Hr1G017960.3	Barley	plastid	25.0	43.1
Os01t0897200-01	Rice	extracellular, vacuole	40.0	42.25
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	31.0	38.91
OQU81225	Sorghum	cytosol	15.0	36.59
GSMUA_Achr7P21030_001	Banana	extracellular	26.0	35.14
GSMUA_Achr5P23330_001	Banana	extracellular	26.0	34.36
Zm00001d042511_P005	Maize	golgi, mitochondrion, plasma membrane	39.67	33.71
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	25.0	28.41
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	33.33	28.01
GSMUA_Achr4P08950_001	Banana	extracellular	20.0	24.9
GSMUA_Achr9P07920_001	Banana	plasma membrane	19.0	21.67
GSMUA_Achr9P02260_001	Banana	extracellular, plasma membrane	18.0	21.6
GSMUA_Achr9P07950_001	Banana	extracellular	19.33	19.86
GSMUA_Achr9P07930_001	Banana	extracellular, plastid, vacuole	19.33	19.53
GSMUA_Achr9P07940_001	Banana	mitochondrion	18.67	17.07

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004521	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0010168	GO:GO:0010507	GO:GO:0016075	GO:GO:0016787
GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:GSMUA_Achr7G23750_001	EnsemblPlants:GSMUA_Achr7P23750_001	EnsemblPlants:GSMUA_Achr7T23750_001	InterPro:IPR036430
UniProt:M0TK61	PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf
InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	TMHMM:TMhelix	UniParc:UPI000296271B	SEG:seg	:

Description

Ribonuclease 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G23750_001]

Coordinates

chr7:+:25825535..25831111

Molecular Weight (calculated)

33417.3 Da

IEP (calculated)

8.013

GRAVY (calculated)

-0.016

Length

300 amino acids

Sequence
(BLAST)

001: MRLFSRGTFY SIGSPISRRT IGRKTRERER EAMACVMRLL GLLFVLVCSL SLPLPSFHSV VATGQREFDY FVLALLWPGT ICQATHHCCS SNACCRSNPL
101: PEFTIHGLWT DYNDGSWPAC CSHSDFDIKK ITSLLPTLEK YWPSLYCSSS SLCFGGKGLF WAHEKHGTCS YPIIQDEYSY FSTALGLYFK NNMTEVLNNA
201: GILATNGEKY PLGDVVATIK RAFGATPLLV CKHGSLEELR LCFYKDYKPR DCVTGSDILN GMPHSRNSCP RYITLPTYAP LGLADSSKMA LEAFDALTVA

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.