Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P07950_001 | Banana | extracellular | 76.05 | 68.49 |
| GSMUA_Achr9P07940_001 | Banana | mitochondrion | 75.67 | 60.67 |
| GSMUA_Achr9P07930_001 | Banana | extracellular, plastid, vacuole | 65.78 | 58.25 |
| GSMUA_Achr9P02260_001 | Banana | extracellular, plasma membrane | 40.68 | 42.8 |
| GSMUA_Achr4P08950_001 | Banana | extracellular | 32.32 | 35.27 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 24.71 | 29.28 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 23.57 | 27.31 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 25.1 | 25.0 |
| GSMUA_Achr7P23750_001 | Banana | mitochondrion | 21.67 | 19.0 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | EnsemblPlantsGene:GSMUA_Achr9G07920_001 | EnsemblPlants:GSMUA_Achr9P07920_001 | EnsemblPlants:GSMUA_Achr9T07920_001 |
| InterPro:IPR036430 | UniProt:M0TYF1 | PFAM:PF00445 | PANTHER:PTHR11240 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| SUPFAM:SSF55895 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000294CAE2 | SEG:seg | : |
Description
Putative Ribonuclease 3 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07920_001]
Coordinates
chr9:-:5074630..5075829
Molecular Weight (calculated)
29018.5 Da
IEP (calculated)
4.452
GRAVY (calculated)
0.022
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSKALPTF CFLLCAASCA LAAASYDYMI LSLIWPGTRC QPGWFWQPTC CVDPLIENPE PDFLVETMET YDSATGKLVA NCEPSCRFLL NPLNDLMNDL
101: NAYWPSLSCP AQNGKQVWKA AWCTYGNCTS LSEVNYFGRA LQLRARADVL HALGSKAIIP SETKSYSLED INDALVPRIG FSFTVVCTRN YILWPLIYND
201: YLSQIRVCVS SDGRSIISCP NGRESNCSDT VKFPPVSYPL HGREDDAVSS TVIELPSGDD MAL
101: NAYWPSLSCP AQNGKQVWKA AWCTYGNCTS LSEVNYFGRA LQLRARADVL HALGSKAIIP SETKSYSLED INDALVPRIG FSFTVVCTRN YILWPLIYND
201: YLSQIRVCVS SDGRSIISCP NGRESNCSDT VKFPPVSYPL HGREDDAVSS TVIELPSGDD MAL
001: MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF
Arabidopsis Description
RNS3Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:P42815]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.