Factsheet for GSMUA_Achr9P07950_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P07920_001	Banana	plasma membrane	68.49	76.05
GSMUA_Achr9P07940_001	Banana	mitochondrion	83.56	74.39
GSMUA_Achr9P07930_001	Banana	extracellular, plastid, vacuole	45.89	45.12
GSMUA_Achr9P02260_001	Banana	extracellular, plasma membrane	35.62	41.6
GSMUA_Achr4P08950_001	Banana	extracellular	31.51	38.17
GSMUA_Achr5P23330_001	Banana	extracellular	21.58	27.75
GSMUA_Achr7P21030_001	Banana	extracellular	20.89	27.48
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	21.23	23.48
GSMUA_Achr7P23750_001	Banana	mitochondrion	19.86	19.33

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:GSMUA_Achr9G07950_001	EnsemblPlants:GSMUA_Achr9P07950_001
EnsemblPlants:GSMUA_Achr9T07950_001	InterPro:IPR036430	UniProt:M0TYF4	PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF24
InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029538D3
SEG:seg	:	:	:	:	:

Description

Putative Ribonuclease 3 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07950_001]

Coordinates

chr9:-:5085871..5087044

Molecular Weight (calculated)

31876.7 Da

IEP (calculated)

6.716

GRAVY (calculated)

0.157

Length

292 amino acids

Sequence
(BLAST)

001: MAGSKALPTF CFLLCAASCA LAAASYDYMI LSLIWPGTSC QPGWTGKPAC CVDPLIDNPE PDFLVETMET YDSATGKLVA KCEPNCRFLI NPLVDLLDDL
101: YAYWPSLSCP AQNGKQVWKA AWCTFGNCTS LSEVNYFGRA LQLRARADVL HALGSKAIIP SETKSYSLED IEDALVPKIG FSAVVECTTE MGVLSREYLL
201: SRVRICVSAD GKSIIGCPFA RKSNCGSKVK FYPFTDDMLG RPRHPAAGHI KLPSDKAICV RCHADIIIII LALKHDDLPV CRMSSSSCHM LE

Best Arabidopsis Sequence Match ( AT1G26820.1 )
(BLAST)

001: MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF

Arabidopsis Description

RNS3Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:P42815]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.