Factsheet for GSMUA_Achr9P07940_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
endoplasmic reticulum 1
extracellular 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P07950_001	Banana	extracellular	74.39	83.56
GSMUA_Achr9P07920_001	Banana	plasma membrane	60.67	75.67
GSMUA_Achr9P07930_001	Banana	extracellular, plastid, vacuole	45.12	49.83
GSMUA_Achr9P02260_001	Banana	extracellular, plasma membrane	32.62	42.8
GSMUA_Achr4P08950_001	Banana	extracellular	28.35	38.59
GSMUA_Achr5P23330_001	Banana	extracellular	20.12	29.07
GSMUA_Achr7P21030_001	Banana	extracellular	19.51	28.83
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	19.82	24.62
GSMUA_Achr7P23750_001	Banana	mitochondrion	17.07	18.67

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:GSMUA_Achr9G07940_001	EnsemblPlants:GSMUA_Achr9P07940_001	EnsemblPlants:GSMUA_Achr9T07940_001
InterPro:IPR036430	UniProt:M0TYF3	PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF24	InterPro:RNase_T2-like
InterPro:RNase_T2-like_sf	SUPFAM:SSF55895	UniParc:UPI00029672D1	SEG:seg	:	:

Description

Putative Extracellular ribonuclease LE [Source:GMGC_GENE;Acc:GSMUA_Achr9G07940_001]

Coordinates

chr9:-:5080545..5085869

Molecular Weight (calculated)

36334.3 Da

IEP (calculated)

8.191

GRAVY (calculated)

0.041

Length

328 amino acids

Sequence
(BLAST)

001: MMFYDLSKCI ILRPPCRNRG ALYYIILYSR EQYRCSPTII GGWVGVSSCL FRAIRLIISP DHPSHLCGMA GSKALPTFCF LLCAASCALA AASYDYMILS
101: LRWPGTRCQP GWNGKPTCCV DPLIGNPEPD FLVETMETYD SATGKLVAKC EPNCRFLINP LVDLLDDLNA YWPSLSCPAQ NGKQVWKAAW CTYGNCTSLS
201: EVNYFGRALQ LRARVDILRA LGSKAIIPSE TKSYSLEDIE DALVPKIGFS AVVECTTEMG VLSREYLLSR VRICVSADGK SLIGCPFARK SNCGSKVKFY
301: PFTDDMLGRP RHPAVDHIKL PSDKAMTQ

Best Arabidopsis Sequence Match ( AT1G26820.1 )
(BLAST)

001: MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF

Arabidopsis Description

RNS3Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:P42815]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.