Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- vacuole 2
- extracellular 3
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P07920_001 | Banana | plasma membrane | 58.25 | 65.78 |
| GSMUA_Achr9P07950_001 | Banana | extracellular | 45.12 | 45.89 |
| GSMUA_Achr9P02260_001 | Banana | extracellular, plasma membrane | 38.38 | 45.6 |
| GSMUA_Achr9P07940_001 | Banana | mitochondrion | 49.83 | 45.12 |
| GSMUA_Achr4P08950_001 | Banana | extracellular | 30.64 | 37.76 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 23.57 | 31.53 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 23.23 | 30.4 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 23.91 | 26.89 |
| GSMUA_Achr7P23750_001 | Banana | mitochondrion | 19.53 | 19.33 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | EnsemblPlantsGene:GSMUA_Achr9G07930_001 | EnsemblPlants:GSMUA_Achr9P07930_001 | EnsemblPlants:GSMUA_Achr9T07930_001 |
| InterPro:IPR036430 | UniProt:M0TYF2 | PFAM:PF00445 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF23 | InterPro:RNase_T2-like |
| InterPro:RNase_T2-like_sf | SUPFAM:SSF55895 | UniParc:UPI000296EF98 | SEG:seg | : | : |
Description
Putative Ribonuclease 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07930_001]
Coordinates
chr9:-:5077658..5078874
Molecular Weight (calculated)
32590.3 Da
IEP (calculated)
6.988
GRAVY (calculated)
-0.021
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPATTRPQP VCSTMGLYYP PSPRQLDSSC RMAILKALPG ICLLVLLLCL SSSPAARAAS KPDYLILKLM WPGSYCASSQ PTGKCCMPTN GEPAADFLVQ
101: ALETYDSATG KPVTGCSRSC VFKILPLVNM LDNLYTYYAN LTCPSNSGMP HWKDVWCTYG TCSSLNQSLY FDRALQLRKK VDPLVNLGSS GIIPHATKSY
201: SLDDINDALV PRIGFSFTVV CTRNYILWPF FYEDYLYQIR VCVSSDGRSI IGCPNGRESN CGDTVKFPPV SYPLQGREDD AVSKTVIELP SGDEMAL
101: ALETYDSATG KPVTGCSRSC VFKILPLVNM LDNLYTYYAN LTCPSNSGMP HWKDVWCTYG TCSSLNQSLY FDRALQLRKK VDPLVNLGSS GIIPHATKSY
201: SLDDINDALV PRIGFSFTVV CTRNYILWPF FYEDYLYQIR VCVSSDGRSI IGCPNGRESN CGDTVKFPPV SYPLQGREDD AVSKTVIELP SGDEMAL
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Arabidopsis Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.