Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P07920_001 | Banana | plasma membrane | 42.8 | 40.68 |
| GSMUA_Achr9P07930_001 | Banana | extracellular, plastid, vacuole | 45.6 | 38.38 |
| GSMUA_Achr4P08950_001 | Banana | extracellular | 35.6 | 36.93 |
| GSMUA_Achr9P07950_001 | Banana | extracellular | 41.6 | 35.62 |
| GSMUA_Achr9P07940_001 | Banana | mitochondrion | 42.8 | 32.62 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 28.0 | 31.53 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 28.0 | 30.84 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 28.4 | 26.89 |
| GSMUA_Achr7P23750_001 | Banana | mitochondrion | 21.6 | 18.0 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | EnsemblPlantsGene:GSMUA_Achr9G02260_001 | EnsemblPlants:GSMUA_Achr9P02260_001 | EnsemblPlants:GSMUA_Achr9T02260_001 |
| InterPro:IPR036430 | UniProt:M0TWT3 | PFAM:PF00445 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF35 | InterPro:RNase_T2-like |
| InterPro:RNase_T2-like_sf | SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI000296CA22 | SEG:seg | : |
Description
Putative Extracellular ribonuclease LE [Source:GMGC_GENE;Acc:GSMUA_Achr9G02260_001]
Coordinates
chr9:-:1654047..1655436
Molecular Weight (calculated)
27227.7 Da
IEP (calculated)
6.686
GRAVY (calculated)
0.203
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFRLLFLL GLCLCLSSLV SSKSADFMAL TLVWPGAQCT GDILRICCKP SSGLPARDFQ VQAMETYDSN GKLVKKCSIC AFSADRLSDL LPTLHDYWSD
101: VSCPSNDGVN QWQSAWCTYG TCSSLTQVNY FTRALELRAE VDLLSLFSSY GIVPTKSKLY GLETIKGVLA SHFGASTWVE CNVNTLWFFE SQLYKIHICI
201: AADGSSIIDC PVTKRSNCGD TVRFVPFPWT SAAAGEGKLE SGPSGKAMVL
101: VSCPSNDGVN QWQSAWCTYG TCSSLTQVNY FTRALELRAE VDLLSLFSSY GIVPTKSKLY GLETIKGVLA SHFGASTWVE CNVNTLWFFE SQLYKIHICI
201: AADGSSIIDC PVTKRSNCGD TVRFVPFPWT SAAAGEGKLE SGPSGKAMVL
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Arabidopsis Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.