Factsheet for Os07t0630400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G028430.1	Barley	extracellular	63.28	67.5
TraesCS2D01G163300.1	Wheat	extracellular	63.28	67.22
TraesCS2A01G157400.1	Wheat	extracellular	62.89	66.81
TraesCS2B01G182900.1	Wheat	extracellular	62.5	66.67
EER97591	Sorghum	extracellular	65.23	66.53
TraesCS2D01G163200.1	Wheat	extracellular	62.5	66.39
Zm00001d022228_P001	Maize	extracellular	64.06	63.32
Os07t0629300-00	Rice	cytosol	24.22	46.27
Os08t0434100-01	Rice	extracellular	39.45	44.1
Os07t0629900-00	Rice	cytosol, extracellular	33.98	41.43
Os09t0537700-02	Rice	extracellular	25.78	26.19
Os01t0897300-01	Rice	extracellular	26.56	24.46
Os09t0538000-04	Rice	extracellular	23.44	23.17
Os01t0897200-01	Rice	extracellular, vacuole	23.05	20.77

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	EntrezGene:4343992	EMBL:AK060320	EMBL:AK104512	ProteinID:BAC20682.1
ProteinID:BAF22270.1	ProteinID:BAT02765.1	ProteinID:EAZ40755.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	EnsemblPlantsGene:Os07g0630400
EnsemblPlants:Os07t0630400-01	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF18
UniProt:Q8H4E4	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic
SUPFAM:SSF55895	SignalP:SignalP-noTM	UniParc:UPI000005E6C0	RefSeq:XP_015645328.1	SEG:seg	:

Description

RIBONUCLEASE 1Ribonuclease T2 family protein. (Os07t0630400-01)

Coordinates

chr7:+:26141469..26142921

Molecular Weight (calculated)

27843.0 Da

IEP (calculated)

5.641

GRAVY (calculated)

-0.221

Length

256 amino acids

Sequence
(BLAST)

001: MKLAVVAVAA LLLAAGVASA DEFDFFYLVQ QWPGSFCDTQ AGCCFPDTGK PAAEFGIHGL WPNYAKCRPA AGAVADDDDG VVEMVVDGGA AVERHHRRRQ
101: KCWPEYCDDG NKLRPWEIKD LVAELDANWP TLSCKGGKSF EFWSYEWKKH GTCSGMGQHG YFAAALELKK RHDLAAVLAG AGIVPSDDES YSLGSIRDAI
201: AAATGAVPNL ECNRDAAGET QLFQVYQCVD RSGKKLVDCQ LPMQGKCRDK VKLPTF

Best Arabidopsis Sequence Match ( AT2G02990.1 )
(BLAST)

001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF

Arabidopsis Description

RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.