Factsheet for Os07t0629900-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
YLoc:	cytosol

extracellular: 19226311

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0629300-00	Rice	cytosol	40.0	62.69
Os07t0630400-01	Rice	extracellular	41.43	33.98
Os08t0434100-01	Rice	extracellular	33.81	31.0
Os01t0897200-01	Rice	extracellular, vacuole	28.1	20.77
Os01t0897300-01	Rice	extracellular	26.67	20.14
Os09t0538000-04	Rice	extracellular	24.29	19.69
HORVU2Hr1G037400.1	Barley	extracellular	15.71	18.86
Os09t0537700-02	Rice	extracellular	22.38	18.65

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A0P0X972	ProteinID:BAT02764.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430
EnsemblPlantsGene:Os07g0629900	EnsemblPlants:Os07t0629900-00	PFAM:PF00445	ScanProsite:PS00530	PANTHER:PTHR11240	PANTHER:PTHR11240:SF18
InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	UniParc:UPI000393C129

Description

RIBONUCLEASE 8Ribonuclease T2 domain containing protein. (Os07t0629900-00)

Coordinates

chr7:+:26127624..26128255

Molecular Weight (calculated)

23831.2 Da

IEP (calculated)

7.360

GRAVY (calculated)

-0.574

Length

210 amino acids

Sequence
(BLAST)

001: QWPDSYCSTH KCLVKPPPPS HFTIHGLWPS YNKLIDGKMW LEDCNKEDPL DPTQIQDLEK QLDQKWPSLK QTNLEFWSLE WKKHGTCSNL GQHAYFEAAL
101: ALERLTNLTK ILADGGVGPS DVKTYTFREI SDALARGTGF RTYFKCSKNK AGDTLLSEVR QCVDRYGEKL INCTALSFDY CDNADKIKMP QSGYMISSST
201: SYNLAATRSI

Best Arabidopsis Sequence Match ( AT2G02990.1 )
(BLAST)

001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF

Arabidopsis Description

RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.