Factsheet for Zm00001d022630_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plastid: 20089766
plastid: 22065420

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99263	Sorghum	extracellular	80.95	79.07
TraesCS1A01G152600.1	Wheat	unclear	59.13	59.13
TraesCS1D01G149700.1	Wheat	endoplasmic reticulum, extracellular	57.94	57.94
HORVU1Hr1G093620.1	Barley	extracellular	57.14	57.14
TraesCS1B01G170100.1	Wheat	endoplasmic reticulum, extracellular	57.94	57.03
Os09t0538000-04	Rice	extracellular	57.14	55.6
HORVU1Hr1G093570.1	Barley	vacuole	57.14	51.43
GSMUA_Achr4P08950_001	Banana	extracellular	39.29	41.08
Zm00001d032186_P001	Maize	extracellular	28.57	31.44
Zm00001d022228_P001	Maize	extracellular	23.81	23.17
Zm00001d042511_P005	Maize	golgi, mitochondrion, plasma membrane	22.22	15.86
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	15.48	10.92

Protein Annotations

EntrezGene:100126898	Gene3D:3.90.730.10	MapMan:35.1	UniProt:B6SSH9	EMBL:EU955694	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502
InterPro:IPR036430	ProteinID:ONM61300.1	PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF23	InterPro:RNase_T2-like
InterPro:RNase_T2-like_sf	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	UniParc:UPI000182B334	EnsemblPlantsGene:Zm00001d022630
EnsemblPlants:Zm00001d022630_P001	EnsemblPlants:Zm00001d022630_T001	SEG:seg	:	:	:

Description

knotted1 induced1 knotted1 induced1

Coordinates

chr7:+:181798165..181799397

Molecular Weight (calculated)

27643.3 Da

IEP (calculated)

8.182

GRAVY (calculated)

-0.085

Length

252 amino acids

Sequence
(BLAST)

001: MASCRMALLL GLLLLVVASP AIADDDSGIY YQLALMWPGA YCEQTSAGCC KPTTGVSPAR DFYITGFTVL NATTDAAVTG CSNKVPYDPN LITGIQGLNQ
101: YWSNIRCPSN NGQSSWKNAW KKAGACSGLS EKDYFETALS FRSRINPLVR LKAKGIEPDF GLYGLKAITK VFKSGINATP VIQCSKGPFD KYMLFQLYFC
201: AAGNGTFIDC PAPQQYTCSK EILFHPFKKW MLKQQLNQDD DPFQLPGVAM DN

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.