Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G152600.1 | Wheat | unclear | 95.63 | 95.63 |
| TraesCS1B01G170100.1 | Wheat | endoplasmic reticulum, extracellular | 96.03 | 94.53 |
| HORVU1Hr1G093620.1 | Barley | extracellular | 93.65 | 93.65 |
| HORVU1Hr1G093570.1 | Barley | vacuole | 93.65 | 84.29 |
| Os09t0538000-04 | Rice | extracellular | 61.9 | 60.23 |
| Zm00001d022630_P001 | Maize | plastid | 57.94 | 57.94 |
| EER99263 | Sorghum | extracellular | 55.56 | 54.26 |
| GSMUA_Achr4P08950_001 | Banana | extracellular | 41.67 | 43.57 |
| TraesCS1D01G149800.1 | Wheat | extracellular | 41.27 | 42.45 |
| TraesCS2D01G260000.1 | Wheat | extracellular | 27.78 | 30.43 |
| TraesCS6D01G320200.1 | Wheat | extracellular | 26.98 | 29.82 |
| TraesCS2D01G163200.1 | Wheat | extracellular | 26.98 | 28.22 |
| TraesCS2D01G163300.1 | Wheat | extracellular | 25.79 | 26.97 |
| TraesCS2D01G163100.1 | Wheat | extracellular | 24.6 | 26.61 |
| TraesCS3D01G392300.1 | Wheat | extracellular | 20.24 | 18.15 |
| TraesCS3D01G392200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 20.24 | 18.02 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0016787 | GO:GO:0033897 | InterPro:IPR036430 | PFAM:PF00445 |
| PANTHER:PTHR11240 | PANTHER:PTHR11240:SF23 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G149700 | EnsemblPlants:TraesCS1D01G149700.1 | TIGR:cd01061 | SEG:seg |
Description
No Description!
Coordinates
chr1D:+:206099753..206101056
Molecular Weight (calculated)
27426.1 Da
IEP (calculated)
8.017
GRAVY (calculated)
0.071
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFRTALLCL LGMLIASPAI AVSDSGTYYQ IGLMWPGAYC AQTTRGCCMP KSPVVPAADF YVSGFTVFNA TTDAPETSCS STPLNSDEIL EISGLRQFWS
101: NIKCPSNNGQ SSWKSAWKTS GVCSGLDDKA YFQAAIALRS KINPLSRLVS KGIKPDFGLY SLEKIKKVIQ AGTGVTPVIQ CSEGPFDKFQ LYQIFICVAR
201: DAETLIECPK PQKFTCSDEI LFHPFKKWML KQAASSVSYA EAFEMAGAAM GY
101: NIKCPSNNGQ SSWKSAWKTS GVCSGLDDKA YFQAAIALRS KINPLSRLVS KGIKPDFGLY SLEKIKKVIQ AGTGVTPVIQ CSEGPFDKFQ LYQIFICVAR
201: DAETLIECPK PQKFTCSDEI LFHPFKKWML KQAASSVSYA EAFEMAGAAM GY
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Arabidopsis Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.