Factsheet for HORVU0Hr1G017230.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G000910.1
HORVU7Hr1G071270.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G02990.1	HORVU7Hr1G000910.1	AT1G01010.1	21798944
AT2G02990.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT2G02990.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT2G02990.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944
AT2G02990.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G081930.1	Barley	cytosol	31.88	96.05
TraesCS6D01G320200.1	Wheat	extracellular	89.08	89.47
TraesCS6B01G370600.1	Wheat	extracellular	89.08	89.47
TraesCS6A01G339600.1	Wheat	extracellular	89.08	89.47
EES15044	Sorghum	extracellular	73.36	74.67
Zm00001d032186_P001	Maize	extracellular	73.8	73.8
HORVU6Hr1G081950.3	Barley	extracellular	63.76	71.92
Os08t0434100-01	Rice	extracellular	69.43	69.43
HORVU2Hr1G062880.3	Barley	plastid	79.48	69.2
GSMUA_Achr5P23330_001	Banana	extracellular	55.9	56.39
KRH70736	Soybean	extracellular	54.59	55.07
KRG89631	Soybean	endoplasmic reticulum, extracellular	54.15	54.63
CDY62181	Canola	extracellular	53.71	53.71
Bra026570.1-P	Field mustard	extracellular	53.71	53.71
CDY09344	Canola	extracellular	53.71	53.02
AT2G02990.1	Thale cress	extracellular	52.84	52.61
GSMUA_Achr7P21030_001	Banana	extracellular	50.66	52.25
KRH74869	Soybean	endoplasmic reticulum, extracellular, plasma membrane	54.15	52.1
Bra024795.1-P	Field mustard	extracellular	51.09	51.09
CDY45186	Canola	extracellular	51.09	51.09
CDY03023	Canola	extracellular	50.66	50.66
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	48.47	42.05
HORVU2Hr1G028430.1	Barley	extracellular	42.79	40.83
HORVU1Hr1G093560.1	Barley	extracellular	32.31	30.2
HORVU1Hr1G093660.11	Barley	extracellular	32.31	29.6
HORVU1Hr1G093780.1	Barley	vacuole	31.44	29.39
HORVU1Hr1G093670.1	Barley	cytosol	27.07	28.05
HORVU6Hr1G017960.3	Barley	plastid	20.96	27.59
HORVU1Hr1G093620.1	Barley	extracellular	27.51	25.0
HORVU2Hr1G037400.1	Barley	extracellular	18.78	24.57
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	31.88	23.78
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	28.38	22.97
HORVU1Hr1G093570.1	Barley	vacuole	27.51	22.5

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A287E473	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:HORVU0Hr1G017230	EnsemblPlants:HORVU0Hr1G017230.3
InterPro:IPR036430	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PFscan:PS51257	PANTHER:PTHR11240
PANTHER:PTHR11240:SF35	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic
SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B47E718	SEG:seg	:

Description

No Description!

Coordinates

chrchrUn:+:92155406..92156893

Molecular Weight (calculated)

24921.3 Da

IEP (calculated)

4.689

GRAVY (calculated)

-0.107

Length

229 amino acids

Sequence
(BLAST)

001: MMRPCCLSLA LLVALSAVGC AAAQAADYDF FYLVLQVSIY ISPAGERCCY PRTGKPAADF GIHGLWPNRD DGSYPQNCNP ANAFDPSKVS DLLSSLRAEW
101: PTLACPASDG LQFWAHEWEK HGTCAQNLFN EHGYFQTALH LRDQLRVLDA LASAGVAPDG GYYTLSAVKG AIQQGTGFEP FVECNRDESG NSQLYQLYFC
201: VDARASGFVE CPVQPGGRPC GDRIEFPAF

Best Arabidopsis Sequence Match ( AT1G14210.1 )
(BLAST)

001: MRGIIIVSLL ILQSLVVSSS QTEPDFNFFY WVNYWPGAIC DSQKGCCPPT KGNTASDFII HGLWPQFNNG TWPAFCDQTN LFDISKISDL VCQMEKKWTE
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT

Arabidopsis Description

Ribonuclease T2 family protein [Source:UniProtKB/TrEMBL;Acc:F4HUG9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.