Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G254900.1 | Wheat | cytosol | 96.77 | 96.77 |
| VIT_16s0039g02100.t01 | Wine grape | plastid | 49.19 | 70.93 |
| Solyc01g094300.1.1 | Tomato | extracellular | 42.74 | 24.42 |
| TraesCS1A01G376100.1 | Wheat | nucleus | 92.74 | 23.71 |
| TraesCS1A01G379300.1 | Wheat | nucleus | 9.68 | 2.19 |
| TraesCS2A01G119400.1 | Wheat | nucleus | 8.87 | 1.96 |
| TraesCS2A01G125500.1 | Wheat | nucleus | 7.26 | 1.67 |
| TraesCS4A01G141500.1 | Wheat | nucleus | 7.26 | 1.56 |
| TraesCS2A01G125400.1 | Wheat | cytosol, plastid | 4.03 | 1.08 |
| Solyc01g094310.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G254400.1 | EnsemblPlantsGene:TraesCS2A01G254400 | GO:GO:0000244 | GO:GO:0000398 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0046540 | InterPro:Prp31 | InterPro:Prp31_C | PANTHER:PTHR13904 | PANTHER:PTHR13904:SF0 |
| PFAM:PF09785 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:387643036..387645073
Molecular Weight (calculated)
12853.4 Da
IEP (calculated)
10.108
GRAVY (calculated)
-0.323
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MKERYAVTDM MKLANRMQFG IPEESSLGDG LGEGYGMLGQ AGSGKLRVSA AQNKLAAKVA KKFKEKSCGS SGATSGLTSS LAFTPVQGIE LSNPQAHGNL
101: LGSGIQSTYF SETGTFSRIG RPGG
101: LGSGIQSTYF SETGTFSRIG RPGG
001: MATLEDSFLA DLDELSDNEA ELDENDGDVG KEEEDVDMDM ADLETLNYDD LDNVSKLQKS QRYADIMHKV EEALGKDSDG AEKGTVLEDD PEYKLIVDCN
101: QLSVDIENEI VIVHNFIKDK YKLKFQELES LVHHPIDYAC VVKKIGNETD LALVDLADLL PSAIIMVVSV TALTTKGSAL PEDVLQKVLE ACDRALDLDS
201: ARKKVLEFVE SKMGSIAPNL SAIVGSAVAA KLMGTAGGLS ALAKMPACNV QVLGHKRKNL AGFSSATSQS RVGYLEQTEI YQSTPPGLQA RAGRLVAAKS
301: TLAARVDATR GDPLGISGKA FREEIRKKIE KWQEPPPARQ PKPLPVPDSE PKKRRGGRRL RKMKERYQVT DMRKLANRMA FGTPEESSLG DGLGEGYGML
401: GQAGSNRLRV SSVPSKLKIN AKVAKKLKER QYAGGATTSG LTSSLAFTPV QGIELCNPQQ ALGLGSGTQS TYFSESGTFS KLKKI
101: QLSVDIENEI VIVHNFIKDK YKLKFQELES LVHHPIDYAC VVKKIGNETD LALVDLADLL PSAIIMVVSV TALTTKGSAL PEDVLQKVLE ACDRALDLDS
201: ARKKVLEFVE SKMGSIAPNL SAIVGSAVAA KLMGTAGGLS ALAKMPACNV QVLGHKRKNL AGFSSATSQS RVGYLEQTEI YQSTPPGLQA RAGRLVAAKS
301: TLAARVDATR GDPLGISGKA FREEIRKKIE KWQEPPPARQ PKPLPVPDSE PKKRRGGRRL RKMKERYQVT DMRKLANRMA FGTPEESSLG DGLGEGYGML
401: GQAGSNRLRV SSVPSKLKIN AKVAKKLKER QYAGGATTSG LTSSLAFTPV QGIELCNPQQ ALGLGSGTQS TYFSESGTFS KLKKI
Arabidopsis Description
PRP31Emb1220 [Source:UniProtKB/TrEMBL;Acc:A0A178WCJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.