Factsheet for TraesCS3D01G197700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G194100.1	Wheat	cytosol	98.23	98.23
TraesCS3B01G223900.2	Wheat	cytosol	97.73	97.85
HORVU3Hr1G042330.10	Barley	cytosol, plastid	94.44	82.56
EES00727	Sorghum	cytosol, mitochondrion	81.06	81.06
TraesCS1D01G104200.1	Wheat	cytosol	77.65	76.21
Zm00001d009233_P006	Maize	cytosol, mitochondrion	77.9	74.52
CDY51069	Canola	cytosol	35.23	69.58
GSMUA_Achr2P01660_001	Banana	cytosol	68.94	68.94
AT4G15885.1	Thale cress	nucleus	9.72	68.14
VIT_05s0020g01200.t01	Wine grape	cytosol	67.42	65.52
CDY70227	Canola	cytosol	23.48	65.49
CDY51066	Canola	cytosol	16.04	64.8
KRH50824	Soybean	cytosol	66.16	64.37
KRH02264	Soybean	cytosol	65.78	63.93
PGSC0003DMT400021738	Potato	cytosol	52.53	63.13
PGSC0003DMT400011996	Potato	cytosol	63.64	62.84
GSMUA_Achr11P...	Banana	cytosol	65.03	62.8
Solyc12g099540.1.1	Tomato	cytosol	63.51	62.72
Solyc01g066820.2.1	Tomato	cytosol	61.49	62.04
Solyc05g054260.2.1	Tomato	nucleus	63.26	62.01
Bra021186.1-P	Field mustard	cytosol	61.62	61.93
AT3G16630.1	Thale cress	cytosol	61.49	61.34
CDY34962	Canola	cytosol	59.6	61.14
CDX92088	Canola	cytosol	47.6	60.9
Bra012755.1-P	Field mustard	cytosol	62.63	60.27
KRH12061	Soybean	cytosol	65.28	59.29
KRH37102	Soybean	cytosol	64.9	58.81
Bra022171.1-P	Field mustard	cytosol	60.61	56.74
CDY28354	Canola	cytosol	59.97	53.07
CDX90558	Canola	nucleus	13.13	53.06
CDY43118	Canola	endoplasmic reticulum	59.97	50.91
TraesCS3D01G227300.1	Wheat	cytosol	44.44	50.14
CDY70641	Canola	cytosol, nucleus, plastid	11.99	45.45
VIT_06s0009g02690.t01	Wine grape	nucleus	10.23	44.51
VIT_00s0160g00140.t01	Wine grape	extracellular	8.08	43.54
CDY34961	Canola	cytosol	9.47	41.67
VIT_10s0042g00380.t01	Wine grape	cytosol	8.84	33.98
CDX75887	Canola	cytosol	4.67	32.17
TraesCS3D01G218300.1	Wheat	plastid	21.46	21.88
TraesCS5D01G417300.1	Wheat	cytosol, mitochondrion	18.94	21.07
TraesCS1D01G283300.1	Wheat	plastid	15.03	20.41

Protein Annotations

MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase
PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF720
SMART:SM00129	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3D01G197700	EnsemblPlants:TraesCS3D01G197700.1	TIGR:cd01367	SEG:seg

Description

No Description!

Coordinates

chr3D:+:209673507..209688351

Molecular Weight (calculated)

88552.0 Da

IEP (calculated)

5.937

GRAVY (calculated)

-0.672

Length

792 amino acids

Sequence
(BLAST)

001: MARWLQSAGL QHLAVSSSAP GPGLAMGMAG DLRGGGILPN LLMQGYGPQS IEEKQKLYML LRSLNFNGES ASAPISEPYT PTTQSFSGGP PIDGFYSPEL
101: RGEFGAGLLD LHAMDDSELL SENVASEPFE ASPFVPKETD DDEDDIISRS QQGLSENYGG AITREKESNT KESNVGKIKV VVRKRPLNRK EISRKEDDVI
201: DVHNSQFLTV HEPKLKVDLT AYVDKHEFCF DAVLDEAVTN DEVYRETVEP IIPIIFQRTK ATCFAYGQTG SGKTYTMQPL PLRAAQDMVH LLHQPVYLSQ
301: NFKLWLSYFE IYGGKLYDLL SERRPLCIRE DGKKQVCIVG LQEFEVSDVR IVKEYIERGN ASRSTGSTGA NEESSRSHAI LQLAVKKHIP VTETRRQRDR
401: EANEAKNTKL VGKLSFIDLA GSERGADTTD NDKQTRIEGA EINKSLLALK ECIRALDNDQ IHIPFRGSKL TEVLRDSFVG NSRTVMISCI SPGSGSCEHT
501: LNTLRYADRV KSLSKSGNSK KEQFSGQFVS SSKESTHTSY PLSGEAEETV DQIEENRHID ASRRVVEICM SSSVDPDRNS FSMIPSYPHR GREETSSTSS
601: LNDRERIDFK SNLPGYSSKA QSLQNSVNSQ EEDKVTKVSP PRRKANREDK SERQNNYVKK ENGADVNRIV HKQQLKQQQQ RPPSTSASQV SSRQSEKESS
701: CDEEINAILE EEEALIAAHR KEIENTMEIV REEMNLLADV DQPGSLIDNY VAQLNFLLSR KASGLVSLQA RLARFQQRLK EEEILSLKKP SR

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.