Factsheet for PGSC0003DMT400011996

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g099540.1.1	Tomato	cytosol	97.76	97.76
PGSC0003DMT400021738	Potato	cytosol	66.58	81.03
AT4G15885.1	Thale cress	nucleus	10.97	77.88
HORVU1Hr1G022270.1	Barley	cytosol, mitochondrion	14.84	77.78
KRH02264	Soybean	cytosol	76.68	75.46
KRH50824	Soybean	cytosol	76.43	75.31
CDY51069	Canola	cytosol	37.53	75.06
Bra021186.1-P	Field mustard	cytosol	71.57	72.84
AT3G16630.1	Thale cress	cytosol	71.82	72.54
CDY34962	Canola	cytosol	69.58	72.28
CDX92088	Canola	cytosol	54.49	70.6
GSMUA_Achr2P01660_001	Banana	cytosol	69.33	70.2
CDY51066	Canola	cytosol	16.96	69.39
Bra012755.1-P	Field mustard	cytosol	70.95	69.14
CDY70227	Canola	cytosol	24.19	68.31
Zm00001d037599_P001	Maize	extracellular	67.33	67.16
KRH37102	Soybean	cytosol	73.07	67.05
KRH12061	Soybean	cytosol	72.82	66.97
EES17741	Sorghum	cytosol	67.33	66.75
Bra022171.1-P	Field mustard	cytosol	70.32	66.67
Os05t0154700-01	Rice	plasma membrane	67.96	66.54
TraesCS1A01G095000.4	Wheat	cytosol	66.21	65.88
TraesCS1B01G123200.1	Wheat	cytosol	66.08	65.68
TraesCS1D01G104200.1	Wheat	cytosol	65.84	65.43
EES00727	Sorghum	cytosol, mitochondrion	63.97	64.77
GSMUA_Achr11P...	Banana	cytosol	65.96	64.51
TraesCS3B01G223900.2	Wheat	cytosol	62.97	63.84
Zm00001d009840_P001	Maize	cytosol, mitochondrion	66.08	63.78
TraesCS3D01G197700.1	Wheat	cytosol	62.84	63.64
TraesCS3A01G194100.1	Wheat	cytosol	62.59	63.38
CDY28354	Canola	cytosol	69.33	62.12
CDX90558	Canola	nucleus	14.84	60.71
CDY43118	Canola	endoplasmic reticulum	69.83	60.02
Zm00001d009233_P006	Maize	cytosol, mitochondrion	61.85	59.9
VIT_06s0009g02690.t01	Wine grape	nucleus	13.47	59.34
HORVU3Hr1G042330.10	Barley	cytosol, plastid	65.09	57.62
HORVU5Hr1G080740.1	Barley	cytosol	8.23	57.39
PGSC0003DMT400006508	Potato	cytosol	47.63	54.11
CDY70641	Canola	cytosol, nucleus, plastid	13.84	53.11
VIT_00s0160g00140.t01	Wine grape	extracellular	9.1	49.66
CDY34961	Canola	cytosol	10.35	46.11
HORVU1Hr1G022250.2	Barley	plastid	49.0	43.96
VIT_10s0042g00380.t01	Wine grape	cytosol	9.73	37.86
CDX75887	Canola	cytosol	4.61	32.17
PGSC0003DMT400022781	Potato	cytosol	14.21	26.15
PGSC0003DMT400062969	Potato	cytosol	21.95	21.97
PGSC0003DMT400040835	Potato	plastid	10.6	13.87
PGSC0003DMT400078690	Potato	cytosol	4.74	7.63
Os05t0154800-01	Rice	nucleus	0.25	0.79

Protein Annotations

EntrezGene:102605086	MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1A0I8
InterPro:P-loop_NTPase	PFAM:PF00225	EnsemblPlantsGene:PGSC0003DMG400004708	PGSC:PGSC0003DMG400004708	EnsemblPlants:PGSC0003DMT400011996	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF720	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI000294D1A9	RefSeq:XP_006349815.1	RefSeq:XP_015165237.1	RefSeq:XP_015165238.1	RefSeq:XP_015165239.1	SEG:seg

Description

Kif4 [Source:PGSC_GENE;Acc:PGSC0003DMG400004708]

Coordinates

chr12:-:60202143..60209849

Molecular Weight (calculated)

88816.2 Da

IEP (calculated)

6.594

GRAVY (calculated)

-0.671

Length

802 amino acids

Sequence
(BLAST)

001: MGGQTQQSNT AATALYDHSG NAGPAGDAGD AVMARWLQSA GLQHLASTGV DQRLLPNLLM QGYGAQSMEE KQRLFKLMRN LNLNGESASD PYTPTAQSPG
101: GFGSSDGLYS PEFRGDFGAG LLDLHSMDDT ELLTEHVNSE PFEVSPFMPG VNRTFDSDND QQQKAQPEAD AAAGLSTIEK ENNGRENNVA KIKVVVRKRP
201: LNKKEVARKE DDIVTVPDND SLTVHEPKLK VDLTAYVEKH EFCFDAVLDE YVTNDQVYRA TVEPIIPIIF QRTKATCFAY GQTGSGKTYT MQPLPLRAAE
301: DLVRLLHQPI YRNQKFKLWL SFFEIYGGKL FDLLGDRRKL CMREDGRQQV CIVGLQEFEV SDVQIVKEYI ERGNAARSTG STGANEESSR SHAILQLVVK
401: KPNEVKESRR NNDVNESKGG KVVGKISFID LAGSERGADT TDNDRQTRIE GAEINKSLLA LKECIRALDN DQNHIPFRGS KLTEVLRDSF VGNSRTVMIS
501: CISPNAGSCE HTINTLRYAD RVKSLSKSGN TKKDQSASLI PSSVPTLAVP AGAGDAYEQP QESKVLDTRR KAMEKESTSY IPSSDFDKQP SRFGSSLIAN
601: SWAESGANSG GMERDRVEVK NAYSIPGGQK LHSTTNLQSS ADVVDKVPKV SPPRRKAYRD EKSEKPERPG NWSRKDVASV DSSSTSYRQQ STSTPTKSVG
701: SRQNEVSSPP RDENINEILE EEEALIAAHR KEIEDTMEIV REEMKLLAEV DQPGSRIDNY VTQLSFVLSR KAASLVSLQA RLARFQHRLK EQEILSRKRV
801: PR

Best Arabidopsis Sequence Match ( AT3G16630.2 )
(BLAST)

001: MGGQMQQNNA AAATALYDGA LPTNDAGDAV MARWLQSAGL QHLASPVAST GNDQRHLPNL LMQGYGAQTA EEKQRLFQLM RNLNFNGEST SESYTPTAHT
101: SAAMPSSEGF FSPEFRGDFG AGLLDLHAMD DTELLSEHVI TEPFEPSPFM PSVNKEFEED YNLAANRQQR QQTEAEPLGL LPKSDKENNS VAKIKVVVRK
201: RPLNKKETAK KEEDVVTVSD NSLTVHEPRV KVDLTAYVEK HEFCFDAVLD EDVSNDEVYR ATIEPIIPII FQRTKATCFA YGQTGSGKTF TMKPLPIRAV
301: EDLMRLLRQP VYSNQRFKLW LSYFEIYGGK LFDLLSERKK LCMREDGRQQ VCIVGLQEYE VSDVQIVKDF IEKGNAERST GSTGANEESS RSHAILQLVV
401: KKHVEVKDTR RRNNDSNELP GKVVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQLHIPFRG SKLTEVLRDS FVGNSRTVMI
501: SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NSKKDQTANS MPPVNKDPLL GPNDVEDVFE PPQEVNVPET RRRVVEKDSN SSTSGIDFRQ PTNYREESGI
601: PSFSMDKGRS EPNSSFAGST SQRNNISSYP QETSDREEKV KKVSPPRGKG LREEKPDRPQ NWSKRDVSSS DIPTLTNFRQ NASETASRQY ETASRQYETD
701: PSLDENLDAL LEEEEALIAA HRKEIEDTME IVREEMKLLA EVDQPGSMIE NYVTQLSFVL SRKAAGLVSL QARLARFQHR LKEQEILSRK RVPR

Arabidopsis Description

KIN13AKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VP70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.