Factsheet for PGSC0003DMT400022781

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g010810.2.1	Tomato	cytosol	96.79	64.92
VIT_08s0032g01060.t01	Wine grape	cytosol	47.25	63.38
VIT_19s0015g01710.t01	Wine grape	cytosol	46.33	56.42
VIT_09s0054g00130.t01	Wine grape	cytosol	50.92	56.2
VIT_03s0132g00430.t01	Wine grape	cytosol	57.11	52.42
HORVU3Hr1G081700.1	Barley	cytosol	13.99	49.59
AT5G02370.1	Thale cress	cytosol	61.47	47.52
VIT_08s0007g00340.t01	Wine grape	plastid	71.56	47.34
KRG99933	Soybean	plastid	68.81	46.73
KRH49096	Soybean	plastid	67.89	46.11
Bra009596.1-P	Field mustard	plastid	59.86	44.54
Os05t0459400-01	Rice	cytosol, plastid	59.63	44.52
Zm00001d010525_P001	Maize	plastid	57.8	42.78
CDY62566	Canola	plastid	59.86	42.72
EES18348	Sorghum	plastid	58.95	42.48
CDY40350	Canola	plastid	59.4	42.46
CDY55558	Canola	cytosol	57.57	42.18
Bra005719.1-P	Field mustard	cytosol	57.8	42.07
TraesCS1B01G293500.1	Wheat	plastid	55.5	42.01
TraesCS1A01G284300.2	Wheat	plastid	55.5	41.58
CDX80816	Canola	cytosol, plastid	57.8	41.52
TraesCS1D01G283300.1	Wheat	plastid	55.5	41.51
HORVU1Hr1G072370.1	Barley	plastid	54.59	41.03
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	59.63	40.0
PGSC0003DMT400040835	Potato	plastid	29.13	20.72
PGSC0003DMT400021738	Potato	cytosol	25.69	17.0
PGSC0003DMT400006508	Potato	cytosol	26.61	16.43
PGSC0003DMT400062969	Potato	cytosol	26.83	14.61
PGSC0003DMT400011996	Potato	cytosol	26.15	14.21
PGSC0003DMT400078690	Potato	cytosol	2.75	2.41

Protein Annotations

MapMan:20.1.3.9	Gene3D:3.40.850.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1AH79	InterPro:P-loop_NTPase	PFAM:PF00225	EnsemblPlantsGene:PGSC0003DMG400008836
PGSC:PGSC0003DMG400008836	EnsemblPlants:PGSC0003DMT400022781	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115
PANTHER:PTHR24115:SF355	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002953830	SEG:seg	:

Description

Osmotic avoidance abnormal protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008836]

Coordinates

chr9:+:1805808..1807780

Molecular Weight (calculated)

47688.8 Da

IEP (calculated)

8.640

GRAVY (calculated)

-0.321

Length

436 amino acids

Sequence
(BLAST)

001: MNGLKACQTE NLPTPGRVQQ LESAVVTKVR VIVRVRPFLP REINSIDGNP ISCVSVLNSE CEPSEDVTVH LKDHDTSRNE CYKLDAFFGQ EDNNISQIFG
101: KEVSPLIPGI LEGCNVTIFA YGATGSGKTY TMQGTENLPG LVPLAMSSIL SKSQGKSTVA ISYYEIYMDR CYDLLELKEK EIFILDDKDG QIHLKGLAQV
201: AVSSTSEFQE AFSCAVQRRK VAHTGVNDVS SRSHAVLTVY VSTPSCDDTG NVITGKLNLI DLAGNEDNRR TCNTGIRLQE SAKINQSLFA LSNVIYALNN
301: NQPRIPYRES KLTRVLQDSL GGTSRALMVA CLNPGEYQES LHTVSLAARS RHISNFVASA QKGDTPKVKI DMEAKLRAWL ESKGKTKSTQ RIGAFDSPFT
401: SKTPNSICST RKLGLFGSSC KQKSISNQGA SSIKKR

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.