Factsheet for VIT_19s0015g01710.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0032g01060.t01	Wine grape	cytosol	83.8	92.31
VIT_09s0054g00130.t01	Wine grape	cytosol	96.37	87.34
VIT_03s0132g00430.t01	Wine grape	cytosol	91.34	68.84
HORVU3Hr1G081700.1	Barley	cytosol	17.88	52.03
VIT_08s0007g00340.t01	Wine grape	plastid	88.55	48.1
PGSC0003DMT400022781	Potato	cytosol	56.42	46.33
AT5G02370.1	Thale cress	cytosol	56.7	35.99
KRH49096	Soybean	plastid	61.45	34.27
Bra009596.1-P	Field mustard	plastid	55.87	34.13
KRG99933	Soybean	plastid	61.17	34.11
Solyc09g010810.2.1	Tomato	cytosol	60.61	33.38
CDY62566	Canola	plastid	56.42	33.06
CDY40350	Canola	plastid	55.87	32.79
Bra005719.1-P	Field mustard	cytosol	52.79	31.55
Os05t0459400-01	Rice	cytosol, plastid	51.4	31.51
CDX80816	Canola	cytosol, plastid	53.35	31.47
TraesCS1B01G293500.1	Wheat	plastid	49.72	30.9
TraesCS1D01G283300.1	Wheat	plastid	50.0	30.7
HORVU1Hr1G072370.1	Barley	plastid	49.72	30.69
CDY55558	Canola	cytosol	50.84	30.59
EES18348	Sorghum	plastid	51.12	30.25
TraesCS1A01G284300.2	Wheat	plastid	49.16	30.24
Zm00001d010525_P001	Maize	plastid	49.72	30.22
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	52.79	29.08
VIT_16s0050g00670.t01	Wine grape	plastid	27.37	15.24
VIT_07s0205g00140.t01	Wine grape	cytosol	21.79	10.1
VIT_11s0016g03960.t01	Wine grape	cytosol	19.27	10.1
VIT_09s0002g04480.t01	Wine grape	mitochondrion	18.99	9.48
VIT_17s0000g04330.t01	Wine grape	cytosol	18.99	8.94
VIT_05s0020g01200.t01	Wine grape	cytosol	18.44	8.1
VIT_00s0160g00140.t01	Wine grape	extracellular	3.07	7.48
VIT_10s0042g00380.t01	Wine grape	cytosol	2.23	3.88
VIT_06s0009g02690.t01	Wine grape	nucleus	0.56	1.1

Protein Annotations

MapMan:20.1.3.9	Gene3D:3.40.850.10	ProteinID:CCB62062	ProteinID:CCB62062.1	UniProt:F6I4W7	EMBL:FN596747
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF355
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002109BC6	ArrayExpress:VIT_19s0015g01710	EnsemblPlantsGene:VIT_19s0015g01710	EnsemblPlants:VIT_19s0015g01710.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr19:-:10387374..10388450

Molecular Weight (calculated)

39754.1 Da

IEP (calculated)

9.139

GRAVY (calculated)

-0.479

Length

358 amino acids

Sequence
(BLAST)

001: MDRCYDLLEV KAKEIAILDD KDGQIHLKGL YRVPISSMSE FYEVFSRGIQ RRKVAHTGLN DVSSRSHGVL VISVSTPCDD GSDAVVTWKL NLIDLAGNED
101: NRRTCNEGIR LQERAKINQS LFVLSNVIYA FNNNKPRVPY RENKLTRILQ DSLGGTSRAL MVACLNPGEY QESVHTVSLA ARSRHISNSV PSAQKQDTPN
201: VKVDMEAKLR AWLESKGKTK SAERMRALGS SLMSKAPSSL SSLKKPCPCH SSTKAKAITN QGASNAKERV LSVQHRDLFY NGDSVDSGTE RFNFAAENNT
301: NNTEEEFKAG GDGSASETNT ILPDDALAND KKILKLYTWK LQFLRLCFIS YTGIHYLA

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.