Factsheet for VIT_09s0054g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g01710.t01	Wine grape	cytosol	87.34	96.37
VIT_08s0032g01060.t01	Wine grape	cytosol	76.46	92.92
VIT_03s0132g00430.t01	Wine grape	cytosol	91.39	76.0
VIT_08s0007g00340.t01	Wine grape	plastid	89.87	53.87
HORVU3Hr1G081700.1	Barley	cytosol	16.2	52.03
PGSC0003DMT400022781	Potato	cytosol	56.2	50.92
AT5G02370.1	Thale cress	cytosol	58.48	40.96
Bra009596.1-P	Field mustard	plastid	57.72	38.91
KRH49096	Soybean	plastid	62.03	38.16
KRG99933	Soybean	plastid	61.52	37.85
CDY62566	Canola	plastid	58.48	37.81
CDY40350	Canola	plastid	57.72	37.38
Solyc09g010810.2.1	Tomato	cytosol	60.25	36.62
Bra005719.1-P	Field mustard	cytosol	55.19	36.39
CDX80816	Canola	cytosol, plastid	55.7	36.24
CDY55558	Canola	cytosol	53.42	35.46
Os05t0459400-01	Rice	cytosol, plastid	51.65	34.93
Zm00001d010525_P001	Maize	plastid	50.89	34.13
TraesCS1B01G293500.1	Wheat	plastid	49.62	34.03
TraesCS1D01G283300.1	Wheat	plastid	49.87	33.79
HORVU1Hr1G072370.1	Barley	plastid	49.37	33.62
EES18348	Sorghum	plastid	51.14	33.39
TraesCS1A01G284300.2	Wheat	plastid	49.11	33.33
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	50.89	30.92
VIT_16s0050g00670.t01	Wine grape	plastid	28.61	17.57
VIT_07s0205g00140.t01	Wine grape	cytosol	23.29	11.92
VIT_00s0160g00140.t01	Wine grape	extracellular	4.3	11.56
VIT_17s0000g04330.t01	Wine grape	cytosol	21.27	11.04
VIT_11s0016g03960.t01	Wine grape	cytosol	18.99	10.98
VIT_09s0002g04480.t01	Wine grape	mitochondrion	18.99	10.46
VIT_05s0020g01200.t01	Wine grape	cytosol	18.23	8.83
VIT_10s0042g00380.t01	Wine grape	cytosol	3.54	6.8
VIT_06s0009g02690.t01	Wine grape	nucleus	0.76	1.65

Protein Annotations

MapMan:20.1.3.9	Gene3D:3.40.850.10	ProteinID:CCB45085	ProteinID:CCB45085.1	UniProt:F6GYP9	EMBL:FN594972
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF355
SMART:SM00129	SUPFAM:SSF52540	SignalP:SignalP-noTM	UniParc:UPI0002109D13	ArrayExpress:VIT_09s0054g00130	EnsemblPlantsGene:VIT_09s0054g00130
EnsemblPlants:VIT_09s0054g00130.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:+:20315853..20317224

Molecular Weight (calculated)

43632.9 Da

IEP (calculated)

8.314

GRAVY (calculated)

-0.389

Length

395 amino acids

Sequence
(BLAST)

001: MQGTDELPGL MPLTMSAVLT MCWSTASTAE MSYYEVYMDR CHDLLEVKAK EIAILDDKDG QIHLKGLPRV PISSMSEFYE VFSRGIQRRK VAHTGLNDVS
101: SRSHGVLVIS VSTPCDDGSD AVVTWKLNLI DLAGDEDNRR TCNEGIRLQE SAKINQSLFV LSNVIYALNN NKPRVPYRAN KLTRILQDSL GGTCRALMVA
201: CLNPGEYQES VHTVSLAARS HHISNSVPSA QKQDTPNVKV DMEAKLRAWL ESKGKTKSAQ RMRAFGSPLM SKAPSSLSSL KKPCPCHSST KAKAITNQGA
301: SNAKERVLSV QHRNLFYNGD SVDSGTERFN FAAENNTNNT EEEFKAGGDG SASETNTILP DDALANDKKI LKLYTWKLQF LRLCFLSYTG IHYLA

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.