CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40350	Canola	plastid	93.62	93.77
AT5G02370.1	Thale cress	cytosol	73.32	79.43
CDX80816	Canola	cytosol, plastid	78.07	78.58
CDY55558	Canola	cytosol	75.45	77.48
VIT_08s0032g01060.t01	Wine grape	cytosol	32.57	61.23
PGSC0003DMT400022781	Potato	cytosol	42.72	59.86
VIT_09s0054g00130.t01	Wine grape	cytosol	37.81	58.48
VIT_19s0015g01710.t01	Wine grape	cytosol	33.06	56.42
KRH49096	Soybean	plastid	58.76	55.92
KRG99933	Soybean	plastid	58.43	55.61
VIT_03s0132g00430.t01	Wine grape	cytosol	43.21	55.58
VIT_08s0007g00340.t01	Wine grape	plastid	59.57	55.24
Os05t0459400-01	Rice	cytosol, plastid	50.57	52.91
Solyc09g010810.2.1	Tomato	cytosol	55.81	52.46
TraesCS1B01G293500.1	Wheat	plastid	49.26	52.26
TraesCS1A01G284300.2	Wheat	plastid	49.59	52.06
TraesCS1D01G283300.1	Wheat	plastid	49.59	51.97
HORVU1Hr1G072370.1	Barley	plastid	49.26	51.9
EES18348	Sorghum	plastid	50.74	51.24
Zm00001d010525_P001	Maize	plastid	48.61	50.42
HORVU3Hr1G081700.1	Barley	cytosol	9.98	49.59
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	51.23	48.15
CDX86958	Canola	cytosol	7.69	29.19
CDY16872	Canola	plastid	29.79	25.74
CDX87151	Canola	plastid	29.79	25.74
CDX80396	Canola	cytosol, plastid	29.95	25.59
CDX88057	Canola	cytosol	28.97	25.25
CDY51069	Canola	cytosol	13.09	19.95
CDY51066	Canola	cytosol	6.38	19.9
CDY34961	Canola	cytosol	5.56	18.89
CDY20177	Canola	cytosol	20.29	18.26
CDY50622	Canola	cytosol	19.64	17.78
CDX92088	Canola	cytosol	17.84	17.61
CDX75887	Canola	cytosol	3.27	17.39
CDY30131	Canola	cytosol	19.97	17.38
CDX97718	Canola	cytosol	19.97	17.3
CDY21879	Canola	cytosol	14.57	17.18
CDY70227	Canola	cytosol	7.86	16.9
CDX86959	Canola	cytosol	21.93	16.6
CDY00219	Canola	cytosol, mitochondrion	21.93	16.58
CDY19223	Canola	nucleus	19.31	16.39
CDY26149	Canola	nucleus	19.15	16.27
CDY34962	Canola	cytosol	19.97	15.8
CDY28354	Canola	cytosol	19.97	13.63
CDY43118	Canola	endoplasmic reticulum	20.79	13.61
CDX90558	Canola	nucleus	2.62	8.16
CDY70641	Canola	cytosol, nucleus, plastid	2.29	6.7

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	GO:A0A078JAN7	UniProt:A0A078JAN7	EnsemblPlants:CDY62566
ProteinID:CDY62566	ProteinID:CDY62566.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00036391001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF12836
PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like	SMART:SM00129
SUPFAM:SSF47781	SUPFAM:SSF52540	UniParc:UPI0004EE3BB3	SEG:seg	:	:

Description

BnaCnng40390DBnaCnng40390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAN7]

Coordinates

chrLK034160:+:8791..11950

Molecular Weight (calculated)

67383.6 Da

IEP (calculated)

7.981

GRAVY (calculated)

-0.332

Length

611 amino acids

Sequence
(BLAST)

001: MDSKTPLKTN ILNSSCVSKV RVVLRVRPFL PREISEVQPC VSVIDRHHDS EVAVHLKDPL SCRKECYQLD ALFHGRDGDE KVRQIFDREV NPLILGIFNG
101: FNATVLAFGA TGSGKTFTMQ GTDELPGLMP LAMSTILSMC EKTASSAEVS YYEVYMDRCW DLLEVKATEV AIWEDKDGQV HLKGLSSIPV NSMPEFHEAY
201: SCGVLRRKVA HTGLNDVSSR SHGVLVISVL SEGGVTGKIN LIDLAAGNED NRRTGNEGIR LQESAKINQS LFALSNVVYA LNNNLPRVPY RESKLTRILQ
301: DSLGGTSRAL MVACLNPGEY QESLRTVSLA ARSRQISNVV SMNPKVETPK VKVDMEAKLQ AWLESKGKTK SSHRMMPIRS PLIGTNQSSI SRSSVKKLGV
401: HRSAVAGSAK LTGKEQRNAF VSARNLFGGE ISDASQLWEP IQNLHLASPT KEDERETSGE ESLLVSEASL RDNQLEVEKN YNELSPLREA LSPIDSNAMT
501: PKAPLLSGNA KNLQMSGNCQ KFNAWSTNLK TSLVNEYIHF LNTANREELL ELKGIGEKMA DYIIELRETS PVKSLADLEK IGFTSRQVHN LFKRATEGIL
601: EKPLAASTTT P

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.