CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51066	Canola	cytosol	24.84	20.41
CDX86959	Canola	cytosol	98.76	19.7
CDY00219	Canola	cytosol, mitochondrion	98.14	19.55
AT3G49650.1	Thale cress	cytosol	94.41	18.7
VIT_07s0205g00140.t01	Wine grape	cytosol	79.5	16.58
CDY70227	Canola	cytosol	28.57	16.2
GSMUA_Achr4P32130_001	Banana	mitochondrion	74.53	16.0
Solyc02g091780.1.1	Tomato	cytosol, mitochondrion	77.02	15.94
Zm00001d034239_P001	Maize	cytosol	69.57	15.73
KXG37461	Sorghum	cytosol	69.57	15.45
TraesCS5A01G407400.1	Wheat	cytosol, mitochondrion	67.08	15.17
Os03t0773600-01	Rice	cytosol	68.94	15.1
TraesCS5B01G412300.1	Wheat	cytosol, mitochondrion	66.46	15.03
TraesCS5D01G417300.1	Wheat	cytosol, mitochondrion	66.46	15.03
HORVU5Hr1G098780.4	Barley	mitochondrion	63.98	14.19
GSMUA_Achr5P02020_001	Banana	mitochondrion	75.16	10.39
CDY55558	Canola	cytosol	31.06	8.4
CDX80816	Canola	cytosol, plastid	31.06	8.24
CDX92088	Canola	cytosol	31.06	8.08
CDY19223	Canola	nucleus	36.02	8.06
CDY26149	Canola	nucleus	35.4	7.93
CDY62566	Canola	plastid	29.19	7.69
CDY40350	Canola	plastid	28.57	7.54
CDY34962	Canola	cytosol	31.68	6.61
CDY30131	Canola	cytosol	27.95	6.41
CDX97718	Canola	cytosol	27.95	6.38
CDY20177	Canola	cytosol	26.09	6.19
CDY28354	Canola	cytosol	33.54	6.03
CDY50622	Canola	cytosol	24.84	5.93
CDY34961	Canola	cytosol	6.21	5.56
CDY43118	Canola	endoplasmic reticulum	31.06	5.36
CDX75887	Canola	cytosol	3.73	5.22
CDY21879	Canola	cytosol	16.77	5.21
CDY16872	Canola	plastid	20.5	4.67
CDX87151	Canola	plastid	20.5	4.67
CDX80396	Canola	cytosol, plastid	20.5	4.62
CDX88057	Canola	cytosol	19.25	4.42
CDY70641	Canola	cytosol, nucleus, plastid	0.62	0.48
PGSC0003DMT400078690	Potato	cytosol	0.62	0.2
CDX90558	Canola	nucleus	0.0	0.0
CDY51069	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.850.10	MapMan:35.1	GO:A0A078DI16	EnsemblPlants:CDX86958	ProteinID:CDX86958	ProteinID:CDX86958.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00145780001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF372
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EE99F2	SEG:seg	:	:

Description

BnaC03g52280D

Coordinates

chrLK031848:+:861922..863077

Molecular Weight (calculated)

17941.6 Da

IEP (calculated)

8.597

GRAVY (calculated)

-0.276

Length

161 amino acids

Sequence
(BLAST)

001: MPSIRAPVAK KTTTLTVAVK CRPLMEKERG RDIVRVNNSK ELIVLDPDLS KDYLDRIQNR TKEKKYCFDH AFGPESTNKN VYRSISSVIS GVVHGLNATV
101: FAYGSTGSGK TYTMVGTRSD PGLMVLSLNT IFDMIKCDKS SDDFEVTCSY LEVYNEVSLP L

Best Arabidopsis Sequence Match ( AT3G49650.1 )
(BLAST)

001: MPSIRAPAAK KTTTLTVAVK CRPLMEKERG RDIVRVNNSK EVVVLDPDLS KDYLDRIQNR TKEKKYCFDH AFGPESTNKN VYRSMSSVIS SVVHGLNATV
101: FAYGSTGSGK TYTMVGTRSD PGLMVLSLNT IFDMIKSDKS SDEFEVTCSY LEVYNEVIYD LLEKSSGHLE LREDPEQGIV VAGLRSIKVH SADRILELLN
201: LGNSRRKTES TEMNGTSSRS HAVLEIAVKR RQKNQNQVMR GKLALVDLAG SERAAETNNG GQKLRDGANI NRSLLALANC INALGKQHKK GLAYVPYRNS
301: KLTRILKDGL SGNSQTVMVA TISPADSQYH HTVNTLKYAD RAKEIKTHIQ KNIGTIDTHM SDYQRMIDNL QSEVSQLKTQ LAEKESQLSI KPFERGVERE
401: LSWLDGLSHQ ISENVQDRIN LQKALFELEE TNLRNRTELQ HLDDAIAKQA TEKDVVEALS SRRQVILDNI RDNDEAGVNY QRDIEENEKH RCELQDMLNE
501: AINNNGNKTY LHILNQYKLL GMGNTELQFE MAMRDQIIYN QREAQRNLWN LLMGLGVEEK QVFDLAAKQG ITIEDWSSIA LFPGLPYRKQ TPSFIPANIP
601: FVGHSYSKSS CTFQSYQDPS SKGQQWAPTP TLCREEHHSS YYFMRQEPPA FVNLRKSHDG WVGGSRPASR IDTGGNHRRV SYPQTVNNSS PRMASGPTFY
701: QTPQREMLLN TTSPYSSPRV GLINGATTPS VQPFYGSPRA VTVRNGSYNT PLAPAAVSTK GARNQQRVFG TSPLSGTKGV KNSSYGQNSH TKLYRGGGTK
801: GHSKGNNTQR QHQ

Arabidopsis Description

KIN8BKinesin-like protein KIN-8B [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.