CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16872	Canola	plastid	95.47	95.47
Bra026476.1-P	Field mustard	plastid	85.29	94.37
CDX80396	Canola	cytosol, plastid	71.99	71.19
CDX88057	Canola	cytosol	67.61	68.19
VIT_16s0050g00670.t01	Wine grape	plastid	36.78	40.44
KRH38442	Soybean	cytosol	38.47	39.59
KRH08928	Soybean	cytosol	38.76	38.16
PGSC0003DMT400040835	Potato	plastid	31.54	36.38
Solyc03g025470.2.1	Tomato	cytosol, plastid	34.09	36.08
GSMUA_Achr4P11680_001	Banana	cytosol	29.0	31.93
CDY62566	Canola	plastid	25.74	29.79
CDY40350	Canola	plastid	25.32	29.34
CDX80816	Canola	cytosol, plastid	24.33	28.34
CDY55558	Canola	cytosol	23.06	27.39
Os04t0375900-01	Rice	cytosol	26.45	25.76
KXG22514	Sorghum	plastid	26.17	23.36
Zm00001d038961_P002	Maize	plastid	25.18	21.95
CDX86958	Canola	cytosol	4.67	20.5
HORVU7Hr1G000860.1	Barley	cytosol	27.72	18.74
CDY34961	Canola	cytosol	4.24	16.67
CDY51069	Canola	cytosol	9.34	16.46
CDX75887	Canola	cytosol	2.55	15.65
CDY51066	Canola	cytosol	3.96	14.29
CDY20177	Canola	cytosol	13.3	13.84
CDX90558	Canola	nucleus	3.82	13.78
CDY50622	Canola	cytosol	13.01	13.63
CDY30131	Canola	cytosol	13.15	13.25
CDX97718	Canola	cytosol	13.15	13.19
CDY19223	Canola	nucleus	13.15	12.92
CDY26149	Canola	nucleus	13.01	12.8
CDY21879	Canola	cytosol	9.34	12.74
CDX92088	Canola	cytosol	11.03	12.6
CDY34962	Canola	cytosol	13.3	12.18
CDY70227	Canola	cytosol	4.81	11.97
CDX86959	Canola	cytosol	13.3	11.65
CDY00219	Canola	cytosol, mitochondrion	13.3	11.63
CDY43118	Canola	endoplasmic reticulum	14.29	10.83
CDY70641	Canola	cytosol, nucleus, plastid	3.11	10.53
CDY28354	Canola	cytosol	13.15	10.39

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	GO:A0A078DCZ8	EnsemblPlants:CDX87151	ProteinID:CDX87151
ProteinID:CDX87151.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00146070001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF12836	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like	SMART:SM00129	SUPFAM:SSF47781
SUPFAM:SSF52540	UniParc:UPI0004EEC72E	SEG:seg	:	:	:

Description

BnaC09g04660D

Coordinates

chrLK031849:-:799553..803459

Molecular Weight (calculated)

77712.5 Da

IEP (calculated)

7.639

GRAVY (calculated)

-0.458

Length

707 amino acids

Sequence
(BLAST)

001: METKSMSKAV RVVARVKPSS SDPAVEASSA SSVSVHKRDQ SETVSISFGA QFAGSKDSCE LDYFYEENES ASSILAKEIK PLISSVFEGK DANVIAHGAR
101: CSGKTLLIQG SEWEPGLVIL SMAEMLSMAE ERGDSVSVSF YEVSQETVYD VLDKEKRVVS VLEGPPGKIQ LKGLSKASHL VPVKSLSGFQ EVYFGLNKIQ
201: KLVNDPPLRS HRGVMIHVTK GEANSGSFGR MNFLDMAGYE DSRKQCSDLA PPEITRINKS IYALQNVMYA INANESHVPY RESKLTHMLK DCLQGCNRTL
301: LITCLPREFS QDSFYMLNLA SRICLGSKQS MTNATKKSKC PAGSLSSSSA AQKKNTPLAV SATSRQQTGI RKSVTERKSK LNTPASAIKG RKLFGEANDS
401: LKCKNSSKKM EGKSRVAVKK EISTPKVVLK VQASSSEEEV CSSVMVTDSQ SSTVEEDHSV PALSSSEIAM ELSYATTASF VSKVSDPTHK ETPLKHEEEV
501: LEDIYCDDAI ACKAKIVERG EYRSVIEENP TLVNAGESLE KENNYFLANE TASPPLSMQL RELSMTLKSL CNTSNHPSPP EKYQTALTKS YVEELPQHSE
601: ITAEAELKTP ERSMPSKIAC TPWKTFSAHS SKLKNSAVGE YLKFLNTADK EDLKKLKGIG EKRATYIVEL RQESPEPFKE LDDLKDIGLS EKQIKGLLRK
701: EIGDIFQ

Best Arabidopsis Sequence Match ( AT5G23910.2 )
(BLAST)

001: METKMTSHGR KVVRVVARVK PSTDLASTKS ISVQKPMGDD SETVTISFGA QFAGSKDSYR LDYCYEENET TGSILTKEIK PLISTVFEGK DANVIAHGAR
101: NSGKTHLIQG NERELGLAVL TMSEMLSMAE ERGDAIFVSV YEVSQETVYD LLDQEKRVVS VLEGAQGKIQ LKGLSQVPVK SLSEFQNLYF GFKKSQKLTS
201: DLPTRSHKGV MIHVTTGNAN SGSLGRMNFL DMAGYEDSRK QNSALGPLEI ARVNKSIYAL QNVMYALNAN ESHVPYRESK LTRMLKDCLK GSNITLLITC
301: LPREFSQDSF YMLNLASRIC LGGNRAITNP TKKKINGLDR SVSLSSAAQR RQTPLTMSAA SRKQTVLRGN VTERKTKINT ATSAIKARKL FGEANDSVKC
401: KNSSKKVEGK AKMVLKKGIS TSKVVLSVQA SSPKEEICSS ITVTDFQSSL VEEEYSLAFS SSTVAMEPGY SNGASLSSEA IYTTDKETPR KQEEMFAGAT
501: HCDDAFVDKA QIVERDENNS VIEEDLTLVI DEGENLDKEN NSLLANETAS PPLSMRLQEL SNNLKSICKF SNQLSVPEKH QTPLTILQAE EASEHSDITA
601: EAAVSIELRT PEKTMPSNIG CSPWKTYSAH SSKLKNSAVG EYLKFINTAG KEDLKKLKGI GDKRAAYIVE LREESPFKTL DDLQSIGLSA KQVNGLLKKE
701: IGEIF

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G23910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.