CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005719.1-P	Field mustard	cytosol	95.46	94.82
CDX80816	Canola	cytosol, plastid	93.78	91.93
AT5G02370.1	Thale cress	cytosol	73.95	78.01
CDY40350	Canola	plastid	77.98	76.07
CDY62566	Canola	plastid	77.48	75.45
PGSC0003DMT400022781	Potato	cytosol	42.18	57.57
VIT_08s0032g01060.t01	Wine grape	cytosol	30.92	56.62
VIT_09s0054g00130.t01	Wine grape	cytosol	35.46	53.42
VIT_08s0007g00340.t01	Wine grape	plastid	57.98	52.35
VIT_03s0132g00430.t01	Wine grape	cytosol	40.84	51.16
KRH49096	Soybean	plastid	55.13	51.09
VIT_19s0015g01710.t01	Wine grape	cytosol	30.59	50.84
KRG99933	Soybean	plastid	54.79	50.78
Os05t0459400-01	Rice	cytosol, plastid	48.4	49.32
Solyc09g010810.2.1	Tomato	cytosol	53.28	48.77
TraesCS1B01G293500.1	Wheat	plastid	46.89	48.44
EES18348	Sorghum	plastid	49.08	48.26
TraesCS1A01G284300.2	Wheat	plastid	46.89	47.94
TraesCS1D01G283300.1	Wheat	plastid	46.89	47.86
HORVU1Hr1G072370.1	Barley	plastid	46.39	47.59
Zm00001d010525_P001	Maize	plastid	47.06	47.54
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	48.24	44.15
HORVU3Hr1G081700.1	Barley	cytosol	8.91	43.09
CDX86958	Canola	cytosol	8.4	31.06
CDX87151	Canola	plastid	27.39	23.06
CDY16872	Canola	plastid	27.23	22.91
CDX80396	Canola	cytosol, plastid	27.23	22.66
CDX88057	Canola	cytosol	26.39	22.4
CDY51066	Canola	cytosol	7.06	21.43
CDY51069	Canola	cytosol	12.44	18.45
CDY34961	Canola	cytosol	5.55	18.33
CDY70227	Canola	cytosol	8.57	17.96
CDY20177	Canola	cytosol	19.83	17.38
CDX92088	Canola	cytosol	17.82	17.12
CDY50622	Canola	cytosol	18.99	16.74
CDX86959	Canola	cytosol	22.69	16.73
CDY00219	Canola	cytosol, mitochondrion	22.69	16.71
CDY30131	Canola	cytosol	19.5	16.52
CDX97718	Canola	cytosol	19.5	16.45
CDY21879	Canola	cytosol	13.95	16.02
CDY34962	Canola	cytosol	20.67	15.93
CDY19223	Canola	nucleus	19.16	15.83
CDY26149	Canola	nucleus	18.99	15.72
CDX75887	Canola	cytosol	3.03	15.65
CDY28354	Canola	cytosol	20.67	13.74
CDY43118	Canola	endoplasmic reticulum	21.18	13.5
CDX90558	Canola	nucleus	2.69	8.16
CDY70641	Canola	cytosol, nucleus, plastid	2.52	7.18

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	GO:A0A078IVL0	UniProt:A0A078IVL0	EnsemblPlants:CDY55558
ProteinID:CDY55558	ProteinID:CDY55558.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00017025001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like	SMART:SM00129	SUPFAM:SSF47781
SUPFAM:SSF52540	UniParc:UPI0004EDC4F3	SEG:seg	:	:	:

Description

BnaA03g54890DBnaA03g54890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVL0]

Coordinates

chrLK033412:-:42114..45141

Molecular Weight (calculated)

65385.5 Da

IEP (calculated)

8.896

GRAVY (calculated)

-0.271

Length

595 amino acids

Sequence
(BLAST)

001: MDSKTTPLKP NVSDSLSISK VRVVVRVRPF LPPEIPDVRS CVSVVDGDGR DSSEVAVYLK DPDSCRNECY QLDAFYGNGD ENVKQIFDRD VNPLIPDIFR
101: GFNATVLAYG ATGSGKTFTM QGTDDLPGLM PLAMSTILSM CEETASRAEV SYYEVYMDRC WDLLEVKSNE LVVWDDKDGQ VHLKGLSSIP VNSMSEFHEV
201: YSCGLQRRKV AHACFNDVSS RSHGVLVISV FSEGGVTGKI NLIDLAGKIS QGVNIRLQES AKINQSLFAL SNAVYALIKN LPRVPYRESK LTRILQDSLG
301: GTSRALMVAC LNPGEYQESL RTVSLAARSR HITNIISLNP KVETPKVKID MEAKLQAWLE SKGKTKSAHR MMAAIRSPLI GTNQPSFSQS SVKKLGCHQS
401: ATARSAKLTG TGKRDTFVAV RNLFGGETPD ASHLLEPIQN LHLASPTKEV DRDASGKESL LVSELTPVRE ALSPITSNAK PNSAVGSPPM LKPMTPKTPM
501: ISTNAENMQM SGTCQKFNAW STNVKTSLIR EYVHFLNTAN NWKVKNLHGI GQKMAEYIVE LRETSPLKSL ADLEKLGFTS RQVHNLFKRA TEGIL

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.