Factsheet for VIT_03s0132g00430.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g00130.t01	Wine grape	cytosol	76.0	91.39
VIT_19s0015g01710.t01	Wine grape	cytosol	68.84	91.34
VIT_08s0032g01060.t01	Wine grape	cytosol	62.32	91.08
VIT_08s0007g00340.t01	Wine grape	plastid	84.21	60.7
PGSC0003DMT400022781	Potato	cytosol	52.42	57.11
HORVU3Hr1G081700.1	Barley	cytosol	13.26	51.22
AT5G02370.1	Thale cress	cytosol	54.53	45.92
KRH49096	Soybean	plastid	60.84	45.02
KRG99933	Soybean	plastid	60.42	44.7
Bra009596.1-P	Field mustard	plastid	54.11	43.86
CDY62566	Canola	plastid	55.58	43.21
CDY40350	Canola	plastid	54.74	42.62
Solyc09g010810.2.1	Tomato	cytosol	58.11	42.46
Bra005719.1-P	Field mustard	cytosol	53.05	42.07
Os05t0459400-01	Rice	cytosol, plastid	51.37	41.78
CDX80816	Canola	cytosol, plastid	53.26	41.68
CDY55558	Canola	cytosol	51.16	40.84
TraesCS1D01G283300.1	Wheat	plastid	50.11	40.82
TraesCS1B01G293500.1	Wheat	plastid	49.47	40.8
TraesCS1A01G284300.2	Wheat	plastid	49.89	40.72
HORVU1Hr1G072370.1	Barley	plastid	49.05	40.17
EES18348	Sorghum	plastid	50.74	39.83
Zm00001d010525_P001	Maize	plastid	48.84	39.39
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	50.11	36.62
VIT_16s0050g00670.t01	Wine grape	plastid	29.05	21.46
VIT_00s0160g00140.t01	Wine grape	extracellular	4.84	15.65
VIT_07s0205g00140.t01	Wine grape	cytosol	24.21	14.9
VIT_11s0016g03960.t01	Wine grape	cytosol	20.0	13.91
VIT_17s0000g04330.t01	Wine grape	cytosol	21.26	13.27
VIT_09s0002g04480.t01	Wine grape	mitochondrion	19.79	13.11
VIT_05s0020g01200.t01	Wine grape	cytosol	19.16	11.17
VIT_10s0042g00380.t01	Wine grape	cytosol	4.63	10.68
VIT_06s0009g02690.t01	Wine grape	nucleus	1.47	3.85

Protein Annotations

MapMan:20.1.3.9	Gene3D:3.40.850.10	ProteinID:CCB52370	ProteinID:CCB52370.1	UniProt:F6HJH1	EMBL:FN595773
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF355
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002108ADE	ArrayExpress:VIT_03s0132g00430	EnsemblPlantsGene:VIT_03s0132g00430	EnsemblPlants:VIT_03s0132g00430.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:12160675..12163148

Molecular Weight (calculated)

52275.1 Da

IEP (calculated)

8.331

GRAVY (calculated)

-0.418

Length

475 amino acids

Sequence
(BLAST)

001: MKSPLPKNEV SPLIPGIFHG CNATVFAYEA TGSGKTYTMQ GTDELPGLMP LTMLAVLTMC WSTTSTAEMS YYEVYMDGCY DLLEVKAKEI AILDDKGGQI
101: HLKGLSRVPI SSMSEFYEVF SCGIQRRKVA HTGLNDVSSR SHGVLVISVS TPCDDGSSAV VTWKLNLIDL AGNEDNRRTC NKGIRLQESA KINQSLFVLS
201: NVIYAFNNNR PRVPYRENKL TRILQDSLGG TSRALMVACL NPGEYQEPVH TVSLAARSRH ISNSVPSAQK QDTPNVKVDM EAKLRAWLES KGKTKSAQRM
301: KAFGSPLMSK ASSSLSSLKK PCPCHSSTKA KAITNQGASN AKERVLSVQH RNLFYNGDSV DSGTERFNFA AENNTNNTEE EFKAGGDGSA SETNTILPDD
401: ALANDKKILK LYTWKVSPTH VEAFRYNREK TSMEEFSPVS LKKNNEVIFE EISEEEKVGI SMKLCKSCTG SFSMN

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.