Factsheet for VIT_05s0020g01200.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G022270.1	Barley	cytosol, mitochondrion	14.48	77.12
GSMUA_Achr2P01660_001	Banana	cytosol	72.64	74.75
Zm00001d037599_P001	Maize	extracellular	68.71	69.65
EES17741	Sorghum	cytosol	68.59	69.1
VIT_06s0009g02690.t01	Wine grape	nucleus	15.34	68.68
GSMUA_Achr11P...	Banana	cytosol	69.08	68.66
TraesCS1A01G095000.4	Wheat	cytosol	67.61	68.36
TraesCS1B01G123200.1	Wheat	cytosol	67.48	68.15
TraesCS1D01G104200.1	Wheat	cytosol	67.12	67.78
TraesCS3D01G197700.1	Wheat	cytosol	65.52	67.42
EES00727	Sorghum	cytosol, mitochondrion	65.28	67.17
Os05t0154700-01	Rice	plasma membrane	67.48	67.16
TraesCS3B01G223900.2	Wheat	cytosol	65.15	67.13
TraesCS3A01G194100.1	Wheat	cytosol	65.03	66.92
Zm00001d009840_P001	Maize	cytosol, mitochondrion	66.99	65.7
Zm00001d009233_P006	Maize	cytosol, mitochondrion	62.7	61.72
HORVU3Hr1G042330.10	Barley	cytosol, plastid	67.61	60.82
HORVU5Hr1G080740.1	Barley	cytosol	8.1	57.39
VIT_09s0002g04480.t01	Wine grape	mitochondrion	48.22	54.81
VIT_00s0160g00140.t01	Wine grape	extracellular	9.69	53.74
VIT_11s0016g03960.t01	Wine grape	cytosol	44.66	53.29
HORVU1Hr1G022250.2	Barley	plastid	51.17	46.64
VIT_10s0042g00380.t01	Wine grape	cytosol	10.18	40.29
VIT_17s0000g04330.t01	Wine grape	cytosol	22.21	23.78
VIT_07s0205g00140.t01	Wine grape	cytosol	19.39	20.47
VIT_08s0032g01060.t01	Wine grape	cytosol	7.98	20.0
VIT_03s0132g00430.t01	Wine grape	cytosol	11.17	19.16
VIT_08s0007g00340.t01	Wine grape	plastid	15.46	19.12
VIT_19s0015g01710.t01	Wine grape	cytosol	8.1	18.44
VIT_09s0054g00130.t01	Wine grape	cytosol	8.83	18.23
VIT_16s0050g00670.t01	Wine grape	plastid	13.74	17.42
Os05t0154800-01	Rice	nucleus	0.25	0.79

Protein Annotations

EntrezGene:100240940	wikigene:100240940	MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	ProteinID:CBI26049
ProteinID:CBI26049.3	ncoils:Coil	UniProt:D7T6C8	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100240940	wikigene:LOC100240940	InterPro:P-loop_NTPase	PFAM:PF00225
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF720	SMART:SM00129
SUPFAM:SSF52540	TIGR:TC63666	UniParc:UPI000198321A	ArrayExpress:VIT_05s0020g01200	EnsemblPlantsGene:VIT_05s0020g01200	EnsemblPlants:VIT_05s0020g01200.t01
unigene:Vvi.3329	RefSeq:XP_002271765	RefSeq:XP_002271765.1	SEG:seg	:	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:D7T6C8]

Coordinates

chr5:+:2962371..2970901

Molecular Weight (calculated)

90653.6 Da

IEP (calculated)

6.299

GRAVY (calculated)

-0.624

Length

815 amino acids

Sequence
(BLAST)

001: MGGQMQQSNA AATALYDHPG GGTLHNAGPA SDAGDAVMAR WLQSAGLQHL ASPLASTGID HRLLPNLLMQ GYGAQSAEEK QRLFKLMRNL NFNGESGSEP
101: YTPTAQTSGV VASEGFYSPE FRGDFGAGLL DLHAMDDTEL LSEHVISEPF EPSPFMPGAT RAFDNDFNVM TSRQQKGQTE ADPSVGFLAN EKENTKENNV
201: AKIKVVVRKR PLNKKELSRK EDDIVTVSDN AYLTVHEPKL KVDLTAYVEK HEFCFDAVLD EHVTNDEVYR VTVEPIIPII FQRTKATCFA YGQTGSGKTF
301: TMQPLPLRAA EDLVRLLHQP TYRNQRFKLW LSYFEIYGGK LFDLLSDRKK LCMREDGRQQ VCIVGLQEFE VLDVQIVKEY IERGNAARST GSTGANEESS
401: RSHAILQLVV KKHNEIKDSK RNNDGNEAKG GKIVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQIHIPFRG SKLTEVLRDS
501: FVGNSRTVMI SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NAKKDQGVSS LPPVNKESSS AASLPASVDV EDVYEQQPEV KLADMGRRTA DKESSYNHAA
601: DFDRQPSSFS SNYPFNAREE SAVAPGLIDR ERVEMKNTFV GSTSQKMYSS SYSQNSVDTE EKVQKVSPPR RKVPREEKSE KLGNWLKKEG GNTDMPFTSS
701: KQQNTSNSNI NNVVSRQYEP EPPNDGNINA ILEEEEALIA AHRKEIEDTM EIVREEMKLL AEVDQPGSLI DNYVTQLSFV LSRKAAGLVS LQARLARFQH
801: RLKEQEILSR KRVPR

Best Arabidopsis Sequence Match ( AT3G16630.2 )
(BLAST)

001: MGGQMQQNNA AAATALYDGA LPTNDAGDAV MARWLQSAGL QHLASPVAST GNDQRHLPNL LMQGYGAQTA EEKQRLFQLM RNLNFNGEST SESYTPTAHT
101: SAAMPSSEGF FSPEFRGDFG AGLLDLHAMD DTELLSEHVI TEPFEPSPFM PSVNKEFEED YNLAANRQQR QQTEAEPLGL LPKSDKENNS VAKIKVVVRK
201: RPLNKKETAK KEEDVVTVSD NSLTVHEPRV KVDLTAYVEK HEFCFDAVLD EDVSNDEVYR ATIEPIIPII FQRTKATCFA YGQTGSGKTF TMKPLPIRAV
301: EDLMRLLRQP VYSNQRFKLW LSYFEIYGGK LFDLLSERKK LCMREDGRQQ VCIVGLQEYE VSDVQIVKDF IEKGNAERST GSTGANEESS RSHAILQLVV
401: KKHVEVKDTR RRNNDSNELP GKVVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQLHIPFRG SKLTEVLRDS FVGNSRTVMI
501: SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NSKKDQTANS MPPVNKDPLL GPNDVEDVFE PPQEVNVPET RRRVVEKDSN SSTSGIDFRQ PTNYREESGI
601: PSFSMDKGRS EPNSSFAGST SQRNNISSYP QETSDREEKV KKVSPPRGKG LREEKPDRPQ NWSKRDVSSS DIPTLTNFRQ NASETASRQY ETASRQYETD
701: PSLDENLDAL LEEEEALIAA HRKEIEDTME IVREEMKLLA EVDQPGSMIE NYVTQLSFVL SRKAAGLVSL QARLARFQHR LKEQEILSRK RVPR

Arabidopsis Description

KIN13AKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VP70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.