Factsheet for VIT_08s0032g01060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g01710.t01	Wine grape	cytosol	92.31	83.8
VIT_09s0054g00130.t01	Wine grape	cytosol	92.92	76.46
VIT_03s0132g00430.t01	Wine grape	cytosol	91.08	62.32
HORVU3Hr1G081700.1	Barley	cytosol	19.38	51.22
PGSC0003DMT400022781	Potato	cytosol	63.38	47.25
VIT_08s0007g00340.t01	Wine grape	plastid	91.08	44.92
AT5G02370.1	Thale cress	cytosol	61.54	35.46
KRH49096	Soybean	plastid	66.77	33.8
KRG99933	Soybean	plastid	66.46	33.64
Bra009596.1-P	Field mustard	plastid	60.62	33.62
Solyc09g010810.2.1	Tomato	cytosol	66.46	33.23
CDY62566	Canola	plastid	61.23	32.57
CDY40350	Canola	plastid	60.31	32.13
Bra005719.1-P	Field mustard	cytosol	58.46	31.72
CDX80816	Canola	cytosol, plastid	58.77	31.47
Os05t0459400-01	Rice	cytosol, plastid	56.31	31.34
CDY55558	Canola	cytosol	56.62	30.92
TraesCS1B01G293500.1	Wheat	plastid	54.15	30.56
EES18348	Sorghum	plastid	56.62	30.41
Zm00001d010525_P001	Maize	plastid	55.08	30.39
TraesCS1D01G283300.1	Wheat	plastid	54.46	30.36
HORVU1Hr1G072370.1	Barley	plastid	54.15	30.34
TraesCS1A01G284300.2	Wheat	plastid	54.15	30.24
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	56.92	28.46
VIT_16s0050g00670.t01	Wine grape	plastid	29.23	14.77
VIT_07s0205g00140.t01	Wine grape	cytosol	24.31	10.23
VIT_11s0016g03960.t01	Wine grape	cytosol	20.31	9.66
VIT_09s0002g04480.t01	Wine grape	mitochondrion	20.31	9.21
VIT_17s0000g04330.t01	Wine grape	cytosol	21.54	9.2
VIT_05s0020g01200.t01	Wine grape	cytosol	20.0	7.98
VIT_00s0160g00140.t01	Wine grape	extracellular	3.38	7.48
VIT_10s0042g00380.t01	Wine grape	cytosol	2.46	3.88
VIT_06s0009g02690.t01	Wine grape	nucleus	0.62	1.1

Protein Annotations

MapMan:20.1.3.9	Gene3D:3.40.850.10	ProteinID:CCB61565	ProteinID:CCB61565.1	UniProt:F6I3Q5	EMBL:FN596742
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF355
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000210A867	ArrayExpress:VIT_08s0032g01060	EnsemblPlantsGene:VIT_08s0032g01060	EnsemblPlants:VIT_08s0032g01060.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:5325803..5327141

Molecular Weight (calculated)

35828.6 Da

IEP (calculated)

9.744

GRAVY (calculated)

-0.430

Length

325 amino acids

Sequence
(BLAST)

001: MDRCYDLLEV KAKEIAILDD KDGQIHLKGL PRVPISSMSE FYEVFSRGIQ RRKVAHTGLN DVSSRSHGVL VISVSTPCDD GSGAVVTWKL NLIDLAGNED
101: NRRTYNEGIR LQESAKINQS LFVLSNVIYA LNNNKPQVPY RENKLTRILQ DSLGGTSRAL MVACLNPGEY QESVHTVSLA ARSRHISNSV PSAQKQDTPN
201: VKVDMEAKLR AWLESKGKTK SAQRMRAFGS PLMSKAPSSL SSLKKPCPCY SSTKAKAITN QGASNAKERF LSVQHINLFY NGDSVDSGTK RFNFAAENNT
301: NNTEEEFKAL VGGPTSMMFS STLFV

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.