CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55558	Canola	cytosol	91.93	93.78
CDY40350	Canola	plastid	78.91	78.52
CDY62566	Canola	plastid	78.58	78.07
AT5G02370.1	Thale cress	cytosol	72.49	78.01
VIT_08s0032g01060.t01	Wine grape	cytosol	31.47	58.77
PGSC0003DMT400022781	Potato	cytosol	41.52	57.8
VIT_09s0054g00130.t01	Wine grape	cytosol	36.24	55.7
VIT_08s0007g00340.t01	Wine grape	plastid	58.32	53.72
VIT_19s0015g01710.t01	Wine grape	cytosol	31.47	53.35
VIT_03s0132g00430.t01	Wine grape	cytosol	41.68	53.26
KRG99933	Soybean	plastid	55.35	52.34
KRH49096	Soybean	plastid	55.35	52.34
Os05t0459400-01	Rice	cytosol, plastid	48.43	50.34
TraesCS1B01G293500.1	Wheat	plastid	47.61	50.17
TraesCS1A01G284300.2	Wheat	plastid	47.94	50.0
Solyc09g010810.2.1	Tomato	cytosol	53.21	49.69
TraesCS1D01G283300.1	Wheat	plastid	47.61	49.57
EES18348	Sorghum	plastid	49.26	49.42
HORVU1Hr1G072370.1	Barley	plastid	46.95	49.14
Zm00001d010525_P001	Maize	plastid	47.45	48.9
HORVU3Hr1G081700.1	Barley	cytosol	9.56	47.15
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	48.76	45.54
CDX86958	Canola	cytosol	8.24	31.06
CDX87151	Canola	plastid	28.34	24.33
CDY16872	Canola	plastid	28.17	24.19
CDX80396	Canola	cytosol, plastid	27.84	23.64
CDX88057	Canola	cytosol	27.02	23.4
CDY51066	Canola	cytosol	6.75	20.92
CDY34961	Canola	cytosol	5.77	19.44
CDY51069	Canola	cytosol	12.52	18.95
CDY20177	Canola	cytosol	19.77	17.67
CDY70227	Canola	cytosol	8.07	17.25
CDX92088	Canola	cytosol	17.46	17.12
CDY50622	Canola	cytosol	18.95	17.04
CDY30131	Canola	cytosol	19.6	16.95
CDX97718	Canola	cytosol	19.6	16.88
CDX86959	Canola	cytosol	22.41	16.85
CDY00219	Canola	cytosol, mitochondrion	22.41	16.83
CDX75887	Canola	cytosol	3.13	16.52
CDY19223	Canola	nucleus	19.44	16.39
CDY26149	Canola	nucleus	19.28	16.27
CDY21879	Canola	cytosol	13.84	16.22
CDY34962	Canola	cytosol	20.26	15.93
CDY28354	Canola	cytosol	20.43	13.85
CDY43118	Canola	endoplasmic reticulum	20.92	13.61
CDX90558	Canola	nucleus	2.64	8.16
CDY70641	Canola	cytosol, nucleus, plastid	2.8	8.13

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	GO:A0A078CUI6	EnsemblPlants:CDX80816	ProteinID:CDX80816
ProteinID:CDX80816.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00134207001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF12836	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like	SMART:SM00129	SUPFAM:SSF47781
SUPFAM:SSF52540	UniParc:UPI0004EE7363	SEG:seg	:	:	:

Description

BnaC03g00700D

Coordinates

chrLK031823:+:343627..346490

Molecular Weight (calculated)

66703.8 Da

IEP (calculated)

7.921

GRAVY (calculated)

-0.351

Length

607 amino acids

Sequence
(BLAST)

001: MDSKTTPNVS DPPSISKVRV VVRVRPFLPP EIPDVRSCVS VIDGDGRDSS EVAVYLKDPD SCRNECYQLD AFYGNGDENV KQIFDRDVNP LIPEIFRGFN
101: ATVLAYGATG SGKTFTMQGT DDLPGLMPLA MSTILSMCEE TASRAEVSYY EVYMDRCLDL LEVKSNEVAI WDDKNGQVHL KGLSSIPVNS MSEFHEVYSC
201: GLQRRKVAHT CFNDVSSRSH GVLVISVFSE GGVTGKINLI DLAGSGDYRK GVNEEIRLQE SAKINQSLFA LSNAVYALIN NLPRVPYRES KLTRILQDSL
301: GGTSRALMVA CLNPGEYQES LRTVSLAARS RHIKNIISLN PKVETPKVKI DMEAKLQAWL ESKGKTKSAH RMMAIRSPLI GTNQPSFSQS SVKKLGCHKS
401: ATARSAKLTG TGQRDTFVAV RNLFGGETPD ASHVLEPIQN LHLASPTKED ERGASGKESL LESELTPVRE ALSPITSNAK PNSAYGSPPM LKPMTPKTPM
501: ISTNAENMQM SGTCQKFNAW STNVKTSLMR EYVHFLNTAN KEELMELKGI GEKMAEYIVE LRETSPLKSL ADLEKLGFTS RQVHNLFKRA TEGILEKSVS
601: ATTTTTP

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.