CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86958	Canola	cytosol	19.7	98.76
CDY00219	Canola	cytosol, mitochondrion	98.27	98.14
AT3G49650.1	Thale cress	cytosol	91.45	90.77
VIT_07s0205g00140.t01	Wine grape	cytosol	65.18	68.13
Zm00001d034239_P001	Maize	cytosol	58.36	66.15
KXG37461	Sorghum	cytosol	58.24	64.83
GSMUA_Achr4P32130_001	Banana	mitochondrion	59.73	64.27
TraesCS5D01G417300.1	Wheat	cytosol, mitochondrion	56.51	64.04
TraesCS5B01G412300.1	Wheat	cytosol, mitochondrion	56.51	64.04
TraesCS5A01G407400.1	Wheat	cytosol, mitochondrion	56.38	63.9
Solyc02g091780.1.1	Tomato	cytosol, mitochondrion	60.97	63.24
Os03t0773600-01	Rice	cytosol	57.5	63.13
HORVU5Hr1G098780.4	Barley	mitochondrion	54.65	60.74
PGSC0003DMT400078690	Potato	cytosol	28.13	45.58
GSMUA_Achr5P02020_001	Banana	mitochondrion	61.83	42.83
CDY19223	Canola	nucleus	23.3	26.11
CDY26149	Canola	nucleus	23.05	25.87
CDY51069	Canola	cytosol	11.52	23.19
CDY55558	Canola	cytosol	16.73	22.69
CDX80816	Canola	cytosol, plastid	16.85	22.41
CDY40350	Canola	plastid	16.6	21.97
CDY51066	Canola	cytosol	5.33	21.94
CDY62566	Canola	plastid	16.6	21.93
CDX92088	Canola	cytosol	15.99	20.84
CDY20177	Canola	cytosol	17.35	20.62
CDY50622	Canola	cytosol	17.1	20.44
CDY30131	Canola	cytosol	17.47	20.09
CDX97718	Canola	cytosol	17.35	19.86
CDY70227	Canola	cytosol	6.69	19.01
CDY34961	Canola	cytosol	4.21	18.89
CDY21879	Canola	cytosol	12.02	18.73
CDY34962	Canola	cytosol	17.35	18.13
CDX75887	Canola	cytosol	2.48	17.39
CDY43118	Canola	endoplasmic reticulum	18.71	16.18
CDY28354	Canola	cytosol	17.84	16.09
CDX80396	Canola	cytosol, plastid	12.14	13.71
CDY16872	Canola	plastid	11.77	13.44
CDX87151	Canola	plastid	11.65	13.3
CDX88057	Canola	cytosol	10.66	12.27
CDY70641	Canola	cytosol, nucleus, plastid	2.48	9.57
CDX90558	Canola	nucleus	1.98	8.16

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	GO:A0A078DF08	EnsemblPlants:CDX86959	ProteinID:CDX86959	ProteinID:CDX86959.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00145781001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF372	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI0004EEE9EE	SEG:seg	:	:	:	:

Description

BnaC03g52290D

Coordinates

chrLK031848:+:868283..872383

Molecular Weight (calculated)

90256.8 Da

IEP (calculated)

9.566

GRAVY (calculated)

-0.672

Length

807 amino acids

Sequence
(BLAST)

001: MPSIRAPVAK KTTTLTVAVK CRPLMEKERG RDIVRVNNSK ELIVLDPDLS KDYLDRIQNR TKEKKYCFDH AFGPESTNKN VYRSISSVIS GVVHGLNATV
101: FAYGSTGSGK TYTMVGTRSD PGLMVLSLNT IFDMIKCDKS SDDFEVTCSY LEVYNEVIYD LLEKSSGHLE LREDPEQGIV VAGLRSIKVY SADRILELLN
201: LGNGRRKTES TEMNSTSSRS HAVLEIAVKR RQKNQNQVMR GKLALVDLAG SERAAETNNG GQKLRDGANI NRSLLALANC INALGKQHKK GLAYVPYRNS
301: KLTRILKDGL SGNSQTVMVA TVSPADTQYH HTVNTLKYAD RAKEIKTHIQ KNIGTIDTHM SDYQRMIDNL QSEVSQLKKQ LAEKESQLSI IPFERGVERE
401: LSWLDGLSHQ ISENVQERIN LQKALFELEE TNLRNRTELQ HLDDAIAKQA TEKDIVEALS SRRQVILDNI RDNDEAGVNY QREIEENEKH RCKLQDMLNE
501: AINNNGNKTY LHILNQYKLL GMGNTELQFE MAMRDQIIYN QREAQRNLWN LLMGLGVEEK QVFDLAAKQG ITIEDWSMAS YPGLPYRKQA PSLIPANIPF
601: MGHSYSQSSC TFQSYNQDAA SKGQQWAPTP TLCREEHHSS YYFMGHEPPA FASLRKSHGG GRPTPWIDTG GANHRRVSYP QTVNNSSHMG PSFYQTPQRE
701: MLVNAPSPYG SPRADRATTP AGQPFYGSPR AIATVRNSSC NSPRVATAVS APSGARNQQR VYGTSPLSGT KGVKNASYGQ NSHTKLYRGG GGSKVHNKGN
801: KTQRQHH

Best Arabidopsis Sequence Match ( AT3G49650.1 )
(BLAST)

001: MPSIRAPAAK KTTTLTVAVK CRPLMEKERG RDIVRVNNSK EVVVLDPDLS KDYLDRIQNR TKEKKYCFDH AFGPESTNKN VYRSMSSVIS SVVHGLNATV
101: FAYGSTGSGK TYTMVGTRSD PGLMVLSLNT IFDMIKSDKS SDEFEVTCSY LEVYNEVIYD LLEKSSGHLE LREDPEQGIV VAGLRSIKVH SADRILELLN
201: LGNSRRKTES TEMNGTSSRS HAVLEIAVKR RQKNQNQVMR GKLALVDLAG SERAAETNNG GQKLRDGANI NRSLLALANC INALGKQHKK GLAYVPYRNS
301: KLTRILKDGL SGNSQTVMVA TISPADSQYH HTVNTLKYAD RAKEIKTHIQ KNIGTIDTHM SDYQRMIDNL QSEVSQLKTQ LAEKESQLSI KPFERGVERE
401: LSWLDGLSHQ ISENVQDRIN LQKALFELEE TNLRNRTELQ HLDDAIAKQA TEKDVVEALS SRRQVILDNI RDNDEAGVNY QRDIEENEKH RCELQDMLNE
501: AINNNGNKTY LHILNQYKLL GMGNTELQFE MAMRDQIIYN QREAQRNLWN LLMGLGVEEK QVFDLAAKQG ITIEDWSSIA LFPGLPYRKQ TPSFIPANIP
601: FVGHSYSKSS CTFQSYQDPS SKGQQWAPTP TLCREEHHSS YYFMRQEPPA FVNLRKSHDG WVGGSRPASR IDTGGNHRRV SYPQTVNNSS PRMASGPTFY
701: QTPQREMLLN TTSPYSSPRV GLINGATTPS VQPFYGSPRA VTVRNGSYNT PLAPAAVSTK GARNQQRVFG TSPLSGTKGV KNSSYGQNSH TKLYRGGGTK
801: GHSKGNNTQR QHQ

Arabidopsis Description

KIN8BKinesin-like protein KIN-8B [Source:UniProtKB/Swiss-Prot;Acc:Q9SCJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.