CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009714.1-P	Field mustard	plastid	88.87	94.97
CDX80396	Canola	cytosol, plastid	88.45	86.71
CDY16872	Canola	plastid	69.04	68.46
CDX87151	Canola	plastid	68.19	67.61
AT5G23910.2	Thale cress	cytosol	67.33	66.95
VIT_16s0050g00670.t01	Wine grape	plastid	38.23	41.68
KRH38442	Soybean	cytosol	38.23	39.01
KRH08928	Soybean	cytosol	39.37	38.44
PGSC0003DMT400040835	Potato	plastid	31.53	36.05
Solyc03g025470.2.1	Tomato	cytosol, plastid	32.95	34.58
GSMUA_Achr4P11680_001	Banana	cytosol	29.1	31.78
CDY62566	Canola	plastid	25.25	28.97
CDY40350	Canola	plastid	24.96	28.69
CDX80816	Canola	cytosol, plastid	23.4	27.02
Os04t0375900-01	Rice	cytosol	27.82	26.86
CDY55558	Canola	cytosol	22.4	26.39
KXG22514	Sorghum	plastid	26.39	23.36
Zm00001d038961_P002	Maize	plastid	25.39	21.95
CDX86958	Canola	cytosol	4.42	19.25
HORVU7Hr1G000860.1	Barley	cytosol	27.53	18.45
CDX75887	Canola	cytosol	2.85	17.39
CDY51069	Canola	cytosol	9.13	15.96
CDY34961	Canola	cytosol	3.85	15.0
CDY51066	Canola	cytosol	3.85	13.78
CDY20177	Canola	cytosol	13.12	13.55
CDY21879	Canola	cytosol	9.99	13.51
CDY50622	Canola	cytosol	12.7	13.19
CDY30131	Canola	cytosol	12.98	12.96
CDX97718	Canola	cytosol	12.98	12.91
CDX90558	Canola	nucleus	3.57	12.76
CDY26149	Canola	nucleus	12.41	12.1
CDY19223	Canola	nucleus	12.41	12.08
CDX92088	Canola	cytosol	10.56	11.95
CDY34962	Canola	cytosol	12.84	11.66
CDY70227	Canola	cytosol	4.56	11.27
CDX86959	Canola	cytosol	12.27	10.66
CDY00219	Canola	cytosol, mitochondrion	12.27	10.64
CDY70641	Canola	cytosol, nucleus, plastid	3.14	10.53
CDY43118	Canola	endoplasmic reticulum	13.84	10.4
CDY28354	Canola	cytosol	12.7	9.94

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	GO:A0A078DGJ6	EnsemblPlants:CDX88057	ProteinID:CDX88057
ProteinID:CDX88057.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00147471001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF12836	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like	SMART:SM00129	SUPFAM:SSF47781
SUPFAM:SSF52540	UniParc:UPI0004EE6142	SEG:seg	:	:	:

Description

BnaA06g26480D

Coordinates

chrLK031854:+:335542..341863

Molecular Weight (calculated)

77738.7 Da

IEP (calculated)

9.644

GRAVY (calculated)

-0.533

Length

701 amino acids

Sequence
(BLAST)

001: MEYISLGSKT PTCPAKQTFR KFTWPEHLWF TKISVLNFVI METELPMTSH GRNKAVRVVA RFKPSVAYPN VKSSSSSSAA AVSVHKPNGH ESETVSISFG
101: AQFPGSKDSY KLDYCYEEDE TTSLILTKEI KPLISTVFEG KDANVIAHGA RGSGKTHLIQ GSEKEPGLAV LTMAEMLSMA GERGYSILVS VYEVHVKSLS
201: EFKELYFGLK KTQKLKGDSP LRSHRGVMIH VTATGSNVSS GSIGRMNFLD LAGYEDSRKQ KTDLVPLEIT RINKSIYALQ NVMYALNANE SHVPYRESKL
301: TRMLKDCLQG SNRTLLITCL PRELSQDSFY MLNLASRICL GGNRAMANAT KKSKGPARSI SSSSVAQRRQ TPLNVTASSK QRTELRANAS ERKIKLNTST
401: SAIKGRKLFG EANGSVKSKN NSNKMEGKEM MAVKKEIFTS KVVLNVQSSA SEEEVCSSFI VKDSQSSLLV KESSVQAVSS SNNLQETPRK HEERFLEATN
501: CVDAVACKAQ IVERDDNRPD AEEGRTPFSE GENMDKENTN LLANEITSPP LSLRLQELSN KLKSICDTSN QPSTPEKYQA AVTKYREQVP EHGDVTAEAE
601: LRTPERSMPL NVGFSPWKTF SAHSSKLKNS AVGEYLKFLN TADKEDLKKL KGIGEKRATY IVELRQESPE PFKKLDDLKD IGLSEKQIKG MLRKEIGDIF
701: Q

Best Arabidopsis Sequence Match ( AT5G23910.2 )
(BLAST)

001: METKMTSHGR KVVRVVARVK PSTDLASTKS ISVQKPMGDD SETVTISFGA QFAGSKDSYR LDYCYEENET TGSILTKEIK PLISTVFEGK DANVIAHGAR
101: NSGKTHLIQG NERELGLAVL TMSEMLSMAE ERGDAIFVSV YEVSQETVYD LLDQEKRVVS VLEGAQGKIQ LKGLSQVPVK SLSEFQNLYF GFKKSQKLTS
201: DLPTRSHKGV MIHVTTGNAN SGSLGRMNFL DMAGYEDSRK QNSALGPLEI ARVNKSIYAL QNVMYALNAN ESHVPYRESK LTRMLKDCLK GSNITLLITC
301: LPREFSQDSF YMLNLASRIC LGGNRAITNP TKKKINGLDR SVSLSSAAQR RQTPLTMSAA SRKQTVLRGN VTERKTKINT ATSAIKARKL FGEANDSVKC
401: KNSSKKVEGK AKMVLKKGIS TSKVVLSVQA SSPKEEICSS ITVTDFQSSL VEEEYSLAFS SSTVAMEPGY SNGASLSSEA IYTTDKETPR KQEEMFAGAT
501: HCDDAFVDKA QIVERDENNS VIEEDLTLVI DEGENLDKEN NSLLANETAS PPLSMRLQEL SNNLKSICKF SNQLSVPEKH QTPLTILQAE EASEHSDITA
601: EAAVSIELRT PEKTMPSNIG CSPWKTYSAH SSKLKNSAVG EYLKFINTAG KEDLKKLKGI GDKRAAYIVE LREESPFKTL DDLQSIGLSA KQVNGLLKKE
701: IGEIF

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G23910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.