Factsheet for PGSC0003DMT400040835

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g025470.2.1	Tomato	cytosol, plastid	93.64	85.93
VIT_16s0050g00670.t01	Wine grape	plastid	46.0	43.86
KRH38442	Soybean	cytosol	41.76	37.26
KRH08928	Soybean	cytosol	42.09	35.93
Bra026476.1-P	Field mustard	plastid	36.38	34.9
Bra009714.1-P	Field mustard	plastid	35.89	33.54
GSMUA_Achr4P11680_001	Banana	cytosol	34.42	32.87
AT5G23910.2	Thale cress	cytosol	36.38	31.63
CDX87151	Canola	plastid	36.38	31.54
CDX88057	Canola	cytosol	36.05	31.53
CDY16872	Canola	plastid	36.22	31.4
CDX80396	Canola	cytosol, plastid	36.05	30.91
PGSC0003DMT400022781	Potato	cytosol	20.72	29.13
Os04t0375900-01	Rice	cytosol	30.67	25.9
KXG22514	Sorghum	plastid	28.22	21.84
Zm00001d038961_P002	Maize	plastid	27.73	20.96
HORVU7Hr1G000860.1	Barley	cytosol	29.53	17.3
PGSC0003DMT400006508	Potato	cytosol	15.5	13.46
PGSC0003DMT400021738	Potato	cytosol	14.03	13.05
PGSC0003DMT400062969	Potato	cytosol	14.85	11.36
PGSC0003DMT400011996	Potato	cytosol	13.87	10.6
PGSC0003DMT400078690	Potato	cytosol	3.1	3.82

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1BAH9	InterPro:P-loop_NTPase	PFAM:PF00225
PFAM:PF12836	EnsemblPlantsGene:PGSC0003DMG400015789	PGSC:PGSC0003DMG400015789	EnsemblPlants:PGSC0003DMT400040835	PRINTS:PR00380	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like	SMART:SM00129	SUPFAM:SSF47781	SUPFAM:SSF52540
UniParc:UPI0002953F8E	:	:	:	:	:

Description

ATP binding / microtubule motor [Source:PGSC_GENE;Acc:PGSC0003DMG400015789]

Coordinates

chr3:+:43416824..43421760

Molecular Weight (calculated)

67698.7 Da

IEP (calculated)

8.514

GRAVY (calculated)

-0.446

Length

613 amino acids

Sequence
(BLAST)

001: MALSTPDSNR LKLNAGPRIS RRVRIVGKIR GFTDQQSAIP GGDSKPWITV SRSQENGSDS SGKVTISFGD EGSSRKDVYE LDNCYEQDDD NGIVFSIEVK
101: PLISEVLSGR NASIIAYGAR GSGKTHTIQG SVDKQGLAAM AIAEILSQTK DVEKAVVVFV SFYEVFQDHV YDLLDPNHPE ATVDSISHFH DLCACWTAPC
201: YSAQKTPLQM PKRSHKGLMI HIASADDIQG SKRPNVMNFV DLAGYEDSRR SSKDGISLTE STRINKSLYA IMNVVYALNT NEKRVPYREG KLTRILQESL
301: GGSNHVLLLT CLNPIPCQDT LYVASLASRS CQSTGQILTS SAMKSKKHTN QQVRLMGTPL SGKKNNSASN LTGRKLFSER KAVISKQDEV ISATKFKPRS
401: KNASTIASSF HKKDASPPNK ATDLEVTPEV LCDVKEIISF PDDGTVGIEK KNEDMSIDKV GSPPLSARLR EITNNLRLLE ASTPLHVLMP KQLDVSHGNL
501: DSCDIIEPKT PKTETDVRTL EIVKYSSPWE KFHTRSSGVK NCLVQEYLNF LNTASKEELT RIKGIGEKRA TYILELREES PEPFKRLEDL QEVGLSAKEV
601: NGLMRRMAGQ LFI

Best Arabidopsis Sequence Match ( AT5G23910.1 )
(BLAST)

001: MTSHGRKVVR VVARVKPSTD LASTKSISVQ KPMGDDSETV TISFGAQFAG SKDSYRLDYC YEENETTGSI LTKEIKPLIS TVFEGKDANV IAHGARNSGK
101: THLIQGNERE LGLAVLTMSE MLSMAEERGD AIFVSVYEVS QETVYDLLDQ EKRVVSVLEG AQGKIQLKGL SQVPVKSLSE FQNLYFGFKK SQKLTSDLPT
201: RSHKGVMIHV TTGNANSGSL GRMNFLDMAG YEDSRKQNSA LGPLEIARVN KSIYALQNVM YALNANESHV PYRESKLTRM LKDCLKGSNI TLLITCLPRE
301: FSQDSFYMLN LASRICLGGN RAITNPTKKK INGLDRSVSL SSAAQRRQTP LTMSAASRKQ TVLRGNVTER KTKINTATSA IKARKLFGEA NDSVKCKNSS
401: KKVEGKAKMV LKKGISTSKV VLSVQASSPK EEICSSITVT DFQSSLVEEE YSLAFSSSTV AMEPGYSNGA SLSSEAIYTT DKETPRKQEE MFAGATHCDD
501: AFVDKAQIVE RDENNSVIEE DLTLVIDEGE NLDKENNSLL ANETASPPLS MRLQELSNNL KSICKFSNQL SVPEKHQTPL TILQAEEASE HSDITAEAAV
601: SIELRTPEKT MPSNIGCSPW KTYSAHSSKL KNSAVGEYLK FINTAGKEDL KKLKGIGDKR AAYIVELREE SPFKTLDDLQ SIGLSAKQVN GLLKKEIGEI
701: F

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G23910]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.