Factsheet for PGSC0003DMT400006508

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g120810.2.1	Tomato	cytosol	98.3	98.58
VIT_09s0002g04480.t01	Wine grape	mitochondrion	79.18	77.96
KRH23459	Soybean	cytosol	74.79	75.32
KRH09867	Soybean	cytosol	74.5	75.04
Bra021158.1-P	Field mustard	cytosol	71.39	74.34
KRH47037	Soybean	cytosol	70.96	74.33
KRH44359	Soybean	cytosol	70.68	74.04
CDY20177	Canola	cytosol	70.82	73.64
Bra023192.1-P	Field mustard	cytosol	68.41	73.52
AT3G16060.1	Thale cress	cytosol	70.68	72.95
CDY50622	Canola	cytosol	69.55	72.74
Bra027194.1-P	Field mustard	cytosol	70.82	72.57
CDY30131	Canola	cytosol	68.41	68.8
CDX97718	Canola	cytosol	68.7	68.79
CDY21879	Canola	cytosol	49.72	67.76
GSMUA_Achr8P15940_001	Banana	cytosol	64.02	64.94
GSMUA_Achr7P14340_001	Banana	cytosol	57.08	63.27
TraesCS3A01G229100.1	Wheat	cytosol	60.34	60.68
TraesCS3D01G227300.1	Wheat	cytosol	60.2	60.54
Zm00001d011405_P001	Maize	cytosol	58.36	60.41
TraesCS3B01G255500.1	Wheat	cytosol	60.06	60.4
Zm00001d044170_P001	Maize	cytosol	58.78	59.12
EES01102	Sorghum	cytosol	58.5	59.08
PGSC0003DMT400021738	Potato	cytosol	48.44	51.9
Os01t0625200-01	Rice	cytosol	22.66	51.78
PGSC0003DMT400011996	Potato	cytosol	54.11	47.63
PGSC0003DMT400022781	Potato	cytosol	16.43	26.61
PGSC0003DMT400062969	Potato	cytosol	23.37	20.6
PGSC0003DMT400040835	Potato	plastid	13.46	15.5
PGSC0003DMT400078690	Potato	cytosol	4.53	6.43

Protein Annotations

EntrezGene:102584807	MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005856
GO:GO:0005874	GO:GO:0005886	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:1903338	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M0ZRH1	InterPro:P-loop_NTPase	PFAM:PF00225
EnsemblPlantsGene:PGSC0003DMG400002539	PGSC:PGSC0003DMG400002539	EnsemblPlants:PGSC0003DMT400006508	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF743	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000295A171	RefSeq:XP_006343058.1
SEG:seg	:	:	:	:	:

Description

BY-2 kinesin 10 [Source:PGSC_GENE;Acc:PGSC0003DMG400002539]

Coordinates

chr3:-:60133079..60139228

Molecular Weight (calculated)

79485.9 Da

IEP (calculated)

6.435

GRAVY (calculated)

-0.764

Length

706 amino acids

Sequence
(BLAST)

001: MNAVGRQRSG TSTGHHQRQY SDNFLETSSN GRWLQSAGLQ HLQTSNNNVP QAPQGQEYGY YGGAQGSRML RGAQRTYSGG SDLFAEPLTP PGNHRQSSQR
101: RNGDEEVYPN EFSPGLLDLH SLDTELLPEM PVAGLYDAPS MHHFARAKSF DDSEQFLANN KQTGRVRGLP ESNVSKSFAV DKDKASNVAK IKVVVRKRPL
201: NKKELTKNEE DIVETRFNSL VVHETKLKVD LTQYVEKHEF VFDAVLNEEV SNDEVYHETV EPIVPIIFQR TKATCFAYGQ TGSGKTYTMK PLPLRASRDL
301: LRLIHHTYRN QGFQLFFSFF EIYGGKLYDL LNDRKKLCMR EDGKQQVCIV GLQEYRVSDV EMIKELIDRG NATRSTGTTG ANEESSRSHA ILQLSVKRSA
401: DGSESKPPRV IGKLSFIDLA GSERGADTTD NDKQTRIEGA EINKSLLALK ECIRALDNDQ NHIPFRGSKL TEVLRDSFVG NSRTVMISCI SPNAGSCEHT
501: LNTLRYADRV KSLSKGNNSK KDVSSSTLNL KESTTLSFSA VVPSTSTFED DTGDSWPEQI DKDEYDEDFY VQEKPMWKKN EKLDGYTISN SEDKMKRANA
601: QTKWKEPPRT EAKYSNSDDD LNALLKDEED LVNAHRKQVE ETMDIVREEM NLLVEADQPG NQLDNYISRL NAILSQKAAG ILELQNQLAH FQKRLKEHNV
701: LVSSGN

Best Arabidopsis Sequence Match ( AT3G16060.1 )
(BLAST)

001: MSGRQRSVAA AVHHQRQLSD NPLDMSSSNG RWLQSTGLQH FQSSANDYGY YAGGQGGGGQ AARGYQNAQR GNEFFGEPTT PQYGARPTNQ RKNNDESEFS
101: PGLLDLHSFD TELLPEIPVS NQLDGPSLFN PSQGQSFDDF EAYNKQPNRS RVLAENLAAE KERMNAVAKI KVVVRKRPLN KKESTKNEED IVDTHANCLT
201: VHETKLKVDL TAYVEKHEFV FDAVLDEEVS NDEVYRETVE PVVPLIFQRI KATCFAYGQT GSGKTYTMKP LPLKASRDIL RLMHHTYRNQ GFQLFVSFFE
301: IYGGKLYDLL SERKKLCMRE DGKQQVCIVG LQEYRVSDTD AIMELIERGS ATRSTGTTGA NEESSRSHAI LQLAIKKSVE GNQSKPPRLV GKLSFIDLAG
401: SERGADTTDN DKQTRLEGAE INKSLLALKE CIRALDNDQG HIPFRGSKLT EVLRDSFMGN SRTVMISCIS PSSGSCEHTL NTLRYADRVK SLSKGNASKK
501: DVSSSTMNLR ESTKIPLSSA LPTPSNFDDD VNEMWTEEND EFDASDYEQD KQMWKKNGKL EPSYNGMAQE RIPKPTIQMK SRDMPRPDMK KSNSDDNLNA
601: LLQEEEDLVN AHRKQVEDTM NIVKEEMNLL VEADQPGNQL DGYISRLNTI LSQKAAGILQ LQNRLAHFQK RLREHNVLVS TTGY

Arabidopsis Description

KIN13BKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V575]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.