Factsheet for PGSC0003DMT400021738

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g054260.2.1	Tomato	nucleus	97.57	79.58
AT4G15885.1	Thale cress	nucleus	12.9	75.22
HORVU1Hr1G022270.1	Barley	cytosol, mitochondrion	17.45	75.16
CDY51069	Canola	cytosol	44.92	73.82
PGSC0003DMT400011996	Potato	cytosol	81.03	66.58
CDX90558	Canola	nucleus	18.06	60.71
KRH50824	Soybean	cytosol	73.9	59.83
KRH02264	Soybean	cytosol	73.75	59.63
Bra021186.1-P	Field mustard	cytosol	70.86	59.26
CDY34962	Canola	cytosol	68.44	58.42
AT3G16630.1	Thale cress	cytosol	70.11	58.19
CDY51066	Canola	cytosol	17.0	57.14
GSMUA_Achr2P01660_001	Banana	cytosol	68.29	56.82
HORVU5Hr1G080740.1	Barley	cytosol	9.71	55.65
Bra012755.1-P	Field mustard	cytosol	69.5	55.65
Zm00001d037599_P001	Maize	extracellular	67.37	55.22
TraesCS1A01G095000.4	Wheat	cytosol	67.07	54.84
TraesCS1B01G123200.1	Wheat	cytosol	66.92	54.65
KRH12061	Soybean	cytosol	72.23	54.59
KRH37102	Soybean	cytosol	72.23	54.46
TraesCS1D01G104200.1	Wheat	cytosol	66.46	54.28
Os05t0154700-01	Rice	plasma membrane	67.22	54.09
EES17741	Sorghum	cytosol	66.31	54.02
CDX92088	Canola	cytosol	50.68	53.96
Bra022171.1-P	Field mustard	cytosol	68.74	53.55
EES00727	Sorghum	cytosol, mitochondrion	64.19	53.41
TraesCS3D01G197700.1	Wheat	cytosol	63.13	52.53
TraesCS3B01G223900.2	Wheat	cytosol	62.97	52.47
Zm00001d009840_P001	Maize	cytosol, mitochondrion	66.01	52.35
TraesCS3A01G194100.1	Wheat	cytosol	62.82	52.27
GSMUA_Achr11P...	Banana	cytosol	64.95	52.2
CDY70227	Canola	cytosol	21.7	50.35
CDY28354	Canola	cytosol	67.98	50.06
CDY70641	Canola	cytosol, nucleus, plastid	15.78	49.76
Zm00001d009233_P006	Maize	cytosol, mitochondrion	62.22	49.52
CDY43118	Canola	endoplasmic reticulum	68.59	48.45
PGSC0003DMT400006508	Potato	cytosol	51.9	48.44
VIT_00s0160g00140.t01	Wine grape	extracellular	10.47	46.94
HORVU3Hr1G042330.10	Barley	cytosol, plastid	63.28	46.03
CDY34961	Canola	cytosol	12.14	44.44
VIT_10s0042g00380.t01	Wine grape	cytosol	11.38	36.41
HORVU1Hr1G022250.2	Barley	plastid	47.8	35.23
CDX75887	Canola	cytosol	5.61	32.17
PGSC0003DMT400022781	Potato	cytosol	17.0	25.69
PGSC0003DMT400062969	Potato	cytosol	24.13	19.85
PGSC0003DMT400040835	Potato	plastid	13.05	14.03
VIT_06s0009g02690.t01	Wine grape	nucleus	2.43	8.79
PGSC0003DMT400078690	Potato	cytosol	6.07	8.03
Os05t0154800-01	Rice	nucleus	0.3	0.79

Protein Annotations

MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1AFM4	InterPro:P-loop_NTPase
PFAM:PF00225	EnsemblPlantsGene:PGSC0003DMG400008437	PGSC:PGSC0003DMG400008437	EnsemblPlants:PGSC0003DMT400021738	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF720	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002960974
SEG:seg	:	:	:	:	:

Description

Internal-motor kinesin [Source:PGSC_GENE;Acc:PGSC0003DMG400008437]

Coordinates

chr5:-:49907542..49916110

Molecular Weight (calculated)

73712.5 Da

IEP (calculated)

7.830

GRAVY (calculated)

-0.762

Length

659 amino acids

Sequence
(BLAST)

001: MPAPNGAFDN GFDAPTHRQQ KAQPDTDAVA GLPIVEKESN TRENNVAKIK VVVRKRPLNK KEISRKEDDI VTVSDNSSLS VHEPKLKVDL TAYVEKHEFC
101: FDAVLDEYIT NDEVYRATVE PIIPTIFQRT KATCFAYGQT GSGKTYTMQP LPLRAAEDLV RLLHQPIYRN QRFKLWLSFF EIYGGKLFDL LSERKKLCMR
201: EDGRQQVCIV GLQEFEVSDV QVVKEFIERG NASRSTGSTG ANEESSRSHA ILQLVVKKHN EVKDTRRNND GNESKGGKVI GKISFIDLAG SERGADTTDN
301: DRLTRIEGAE INKSLLALKE CIRALDNDQL HIPFRGSKLT EVLRDSFVGN SKTVMISCIS PNAGSCEHTL NTLRYADRVK SLSKGGNNKN QSASVTTPTF
401: KEPSLPTTLA ASAEAEDAYE QPQESKVSEA NRRVMEKETT SYNSANVFDK QPSRFSSNQT FNGQDDGGTN FGGMDRDRFE AKNSYGVPAG QRMPSTSNLQ
501: SSTDTEDKVQ KVSPPRRKVS RDEKPEKPGK WSRKDASSSE SSSMSYKQQN ASIRSVGSGQ NEPSSPPHDD NINELLQEEE ALMAAHRKEI EDTMEIVREE
601: MKLLAEVDQP GSLIDNYVTQ LSYVLSRKAA SLVSLQARLS RFQHRLKEQE ILSRKRVPR

Best Arabidopsis Sequence Match ( AT3G16630.2 )
(BLAST)

001: MGGQMQQNNA AAATALYDGA LPTNDAGDAV MARWLQSAGL QHLASPVAST GNDQRHLPNL LMQGYGAQTA EEKQRLFQLM RNLNFNGEST SESYTPTAHT
101: SAAMPSSEGF FSPEFRGDFG AGLLDLHAMD DTELLSEHVI TEPFEPSPFM PSVNKEFEED YNLAANRQQR QQTEAEPLGL LPKSDKENNS VAKIKVVVRK
201: RPLNKKETAK KEEDVVTVSD NSLTVHEPRV KVDLTAYVEK HEFCFDAVLD EDVSNDEVYR ATIEPIIPII FQRTKATCFA YGQTGSGKTF TMKPLPIRAV
301: EDLMRLLRQP VYSNQRFKLW LSYFEIYGGK LFDLLSERKK LCMREDGRQQ VCIVGLQEYE VSDVQIVKDF IEKGNAERST GSTGANEESS RSHAILQLVV
401: KKHVEVKDTR RRNNDSNELP GKVVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQLHIPFRG SKLTEVLRDS FVGNSRTVMI
501: SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NSKKDQTANS MPPVNKDPLL GPNDVEDVFE PPQEVNVPET RRRVVEKDSN SSTSGIDFRQ PTNYREESGI
601: PSFSMDKGRS EPNSSFAGST SQRNNISSYP QETSDREEKV KKVSPPRGKG LREEKPDRPQ NWSKRDVSSS DIPTLTNFRQ NASETASRQY ETASRQYETD
701: PSLDENLDAL LEEEEALIAA HRKEIEDTME IVREEMKLLA EVDQPGSMIE NYVTQLSFVL SRKAAGLVSL QARLARFQHR LKEQEILSRK RVPR

Arabidopsis Description

KIN13AKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VP70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.