Factsheet for Solyc05g054260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021738	Potato	cytosol	79.58	97.57
Solyc12g099540.1.1	Tomato	cytosol	81.81	82.42
Solyc01g066820.2.1	Tomato	cytosol	77.6	79.87
HORVU1Hr1G022270.1	Barley	cytosol, mitochondrion	14.48	76.47
KRH50824	Soybean	cytosol	75.87	75.31
AT4G15885.1	Thale cress	nucleus	10.52	75.22
CDY51069	Canola	cytosol	37.13	74.81
KRH02264	Soybean	cytosol	75.37	74.72
Bra021186.1-P	Field mustard	cytosol	71.66	73.48
CDY34962	Canola	cytosol	69.68	72.93
AT3G16630.1	Thale cress	cytosol	71.41	72.67
CDY51066	Canola	cytosol	17.45	71.94
GSMUA_Achr2P01660_001	Banana	cytosol	69.68	71.09
CDX92088	Canola	cytosol	54.33	70.92
Bra012755.1-P	Field mustard	cytosol	71.16	69.87
CDY70227	Canola	cytosol	24.38	69.37
KRH37102	Soybean	cytosol	73.27	67.73
KRH12061	Soybean	cytosol	73.02	67.66
Zm00001d037599_P001	Maize	extracellular	66.46	66.79
Bra022171.1-P	Field mustard	cytosol	69.18	66.08
TraesCS1A01G095000.4	Wheat	cytosol	65.59	65.76
Os05t0154700-01	Rice	plasma membrane	66.58	65.69
EES17741	Sorghum	cytosol	65.72	65.64
TraesCS1B01G123200.1	Wheat	cytosol	65.47	65.55
TraesCS1D01G104200.1	Wheat	cytosol	65.1	65.18
EES00727	Sorghum	cytosol, mitochondrion	63.49	64.77
GSMUA_Achr11P...	Banana	cytosol	65.35	64.39
TraesCS3D01G197700.1	Wheat	cytosol	62.01	63.26
TraesCS3B01G223900.2	Wheat	cytosol	61.88	63.21
Zm00001d009840_P001	Maize	cytosol, mitochondrion	64.6	62.82
TraesCS3A01G194100.1	Wheat	cytosol	61.51	62.75
CDY28354	Canola	cytosol	69.06	62.35
CDX90558	Canola	nucleus	14.73	60.71
VIT_06s0009g02690.t01	Wine grape	nucleus	13.61	60.44
Zm00001d009233_P006	Maize	cytosol, mitochondrion	61.26	59.78
CDY43118	Canola	endoplasmic reticulum	68.94	59.7
HORVU3Hr1G042330.10	Barley	cytosol, plastid	64.48	57.51
HORVU5Hr1G080740.1	Barley	cytosol	8.04	56.52
Solyc03g120810.2.1	Tomato	cytosol	47.65	54.69
VIT_00s0160g00140.t01	Wine grape	extracellular	9.41	51.7
CDY70641	Canola	cytosol, nucleus, plastid	12.87	49.76
CDY34961	Canola	cytosol	10.02	45.0
HORVU1Hr1G022250.2	Barley	plastid	49.01	44.3
VIT_10s0042g00380.t01	Wine grape	cytosol	9.9	38.84
CDX75887	Canola	cytosol	4.7	33.04
Solyc03g114380.2.1	Tomato	cytosol	21.66	22.46
Solyc09g010810.2.1	Tomato	cytosol	16.46	20.46
Solyc02g091780.1.1	Tomato	cytosol, mitochondrion	18.56	19.28
Solyc03g025470.2.1	Tomato	cytosol, plastid	11.51	13.92
Os05t0154800-01	Rice	nucleus	0.25	0.79

Protein Annotations

MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887
InterPro:IPR001752	InterPro:IPR036961	UniProt:K4C2A5	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF720	SMART:SM00129	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc05g054260.2	EnsemblPlants:Solyc05g054260.2.1
UniParc:UPI0002766904	SEG:seg	:	:	:	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:K4C2A5]

Coordinates

chr5:-:64212552..64222042

Molecular Weight (calculated)

89675.9 Da

IEP (calculated)

6.062

GRAVY (calculated)

-0.704

Length

808 amino acids

Sequence
(BLAST)

001: MGGQMQQSNG AATALYDQQG NASPAGDAGD AVMARWLQSA GLQHLASPMA STGVDHRLLL MQGYGAQSME EKQRLFKLMR NLNFNGESAS DPYTPTAESS
101: GGIGPSDGFY SPEFRGDFGA GLLDLHSMDD TELLSEHVIS EPFEQSPFIP APSGAFDNDF DAPTHRQQKA QPDTDAVAGL PIIEKEINTR ENNVAKIKVV
201: VRKRPLNKKE ISRKEDDIVT VSDNASLSVH EPKLKVDLTA YVEKHEFCFD AVLDEYITND EVYRATVEPI IPTIFQRTKA TCFAYGQTGS GKTYTMQPLP
301: LRAAEDLVRL LHQPIYRNQR FKLWLSFFEI YGGKLFDLLS DRKKLCMRED GRQQVCIVGL QEFEVSDVQI VKEFIERGNA SRSTGSTGAN EESSRSHAIL
401: QLVVKKHNEV KDTRRNNDGN ESKGGKVIGK ISFIDLAGSE RGADTTDNDR QTRIEGAEIN KSLLALKECI RALDNDQLHI PFRGSKLTEV LRDSFVGNSK
501: TVMISCISPN AGSCEHTLNT LRYADRVKSL SKGGNTNKNQ SASVTTPTFK EPSLPTTLAA SAEAEDAYEQ PQESRVSEAN RRVVEKETTS YNSANVFDKQ
601: PSRFSSNQTF NSQDDGGTNF GGMDRDRLEA KNNYGVPAGQ RMQSTSNLQS STDTEDKVQK VSPPRRKVSR DEKPEKPGKW SRKDASSSES SSMSYKQQNA
701: SIKSVGSGQN EPSSPPHDDN INELLQEEEA LMAAHRKEIE DTMEIVREEM KLLAEVDQPG SLIDNYVTQL SYVLSRKAAS LVSLQARLSR FQHRLKEQEI
801: LSRKRVPR

Best Arabidopsis Sequence Match ( AT3G16630.2 )
(BLAST)

001: MGGQMQQNNA AAATALYDGA LPTNDAGDAV MARWLQSAGL QHLASPVAST GNDQRHLPNL LMQGYGAQTA EEKQRLFQLM RNLNFNGEST SESYTPTAHT
101: SAAMPSSEGF FSPEFRGDFG AGLLDLHAMD DTELLSEHVI TEPFEPSPFM PSVNKEFEED YNLAANRQQR QQTEAEPLGL LPKSDKENNS VAKIKVVVRK
201: RPLNKKETAK KEEDVVTVSD NSLTVHEPRV KVDLTAYVEK HEFCFDAVLD EDVSNDEVYR ATIEPIIPII FQRTKATCFA YGQTGSGKTF TMKPLPIRAV
301: EDLMRLLRQP VYSNQRFKLW LSYFEIYGGK LFDLLSERKK LCMREDGRQQ VCIVGLQEYE VSDVQIVKDF IEKGNAERST GSTGANEESS RSHAILQLVV
401: KKHVEVKDTR RRNNDSNELP GKVVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQLHIPFRG SKLTEVLRDS FVGNSRTVMI
501: SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NSKKDQTANS MPPVNKDPLL GPNDVEDVFE PPQEVNVPET RRRVVEKDSN SSTSGIDFRQ PTNYREESGI
601: PSFSMDKGRS EPNSSFAGST SQRNNISSYP QETSDREEKV KKVSPPRGKG LREEKPDRPQ NWSKRDVSSS DIPTLTNFRQ NASETASRQY ETASRQYETD
701: PSLDENLDAL LEEEEALIAA HRKEIEDTME IVREEMKLLA EVDQPGSMIE NYVTQLSFVL SRKAAGLVSL QARLARFQHR LKEQEILSRK RVPR

Arabidopsis Description

KIN13AKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VP70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.