Factsheet for Solyc03g114380.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g065490.2.1
Solyc10g006000.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18550.1	Solyc07g065490.2.1	AT4G26630.1	25387881
AT1G18550.1	Solyc10g006000.2.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062969	Potato	cytosol	97.95	95.26
VIT_17s0000g04330.t01	Wine grape	cytosol	74.45	76.22
KRH62967	Soybean	nucleus	59.44	74.68
KRH56713	Soybean	cytosol, plastid	66.62	70.9
KRH03839	Soybean	nucleus	66.37	69.86
GSMUA_Achr6P13660_001	Banana	cytosol	59.56	68.04
Zm00001d042644_P001	Maize	cytosol	27.09	66.77
AT1G18550.1	Thale cress	nucleus	61.87	66.48
CDY19223	Canola	nucleus	60.85	65.83
CDY26149	Canola	nucleus	60.33	65.37
Bra025894.1-P	Field mustard	nucleus	58.02	64.48
Zm00001d048931_P001	Maize	nucleus	27.47	61.14
Os01t0605500-00	Rice	plastid	59.82	60.05
HORVU3Hr1G052930.1	Barley	plastid	58.79	59.56
TraesCS3D01G218300.1	Wheat	plastid	58.79	58.94
TraesCS3B01G246600.1	Wheat	plastid	58.54	58.46
TraesCS3A01G214700.1	Wheat	plastid	58.54	58.31
Zm00001d044420_P001	Maize	mitochondrion	57.51	57.29
EES03243	Sorghum	mitochondrion	57.12	57.12
Solyc02g091780.1.1	Tomato	cytosol, mitochondrion	24.52	24.55
Solyc03g120810.2.1	Tomato	cytosol	20.92	23.15
Solyc12g099540.1.1	Tomato	cytosol	22.46	21.82
Solyc05g054260.2.1	Tomato	nucleus	22.46	21.66
Solyc01g066820.2.1	Tomato	cytosol	21.69	21.53
Solyc09g010810.2.1	Tomato	cytosol	17.07	20.46
Solyc03g025470.2.1	Tomato	cytosol, plastid	12.97	15.12

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752
InterPro:IPR036961	UniProt:K4BKU0	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115
PANTHER:PTHR24115:SF557	SMART:SM00129	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc03g114380.2	EnsemblPlants:Solyc03g114380.2.1	UniParc:UPI00027681D5

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:K4BKU0]

Coordinates

chr3:+:64382412..64387464

Molecular Weight (calculated)

86429.0 Da

IEP (calculated)

10.377

GRAVY (calculated)

-0.618

Length

779 amino acids

Sequence
(BLAST)

001: MPVFTRSQIT DSQPQNEQRI RQRTDQEDTQ MARNLRNPHH GLKEKMKALT LLYEQQKQGS AAIKNQSFKP EDSRLSSHPS VDLVSSGRRA EKEQKQSKTI
101: SLVMRENTMH SSTVTRTYVQ PPPPSGLDDG KENVAVVAGG DRIVGFSYPK RVNPSSNVAR KLSLGSSTMP HTEPRAARRI VKENVQELDS ISEKAASKGG
201: GVDDGGSRIL VFVRLRPISR KEREAGARCC VKIVDGRDVY LTEFATENDY LRLKRLRGRH FTFDASFPDT ATQHDVYSTT TAELVEAVLQ GRNGSVFCYG
301: ATGAGKTYTM LGTIENPGVM VLAIKDLFSK IRQRSFDGNH VVHLSYLEVY NETVRDLLSP GRPLVLREDK QGIVAAGLTQ YRAYSTDEVM ALLQQGNLNR
401: TTEPTRCNET SSRSHAILQV VIEYHVKDSS NNIVSRVGKL SLIDLAGSER ALATDQRTLR SLEGANINKS LLALSSCINA LVEGKKHIPY RNSKLTQLLK
501: DSLGGACNTV MIANISPSNL SFGETQNTLH WADRAKEIRT KAYDAHEEMQ IPDSETDQAK LLLELQKENR ELRMRLAHQQ QKLITIQKEN LAANSSPAPS
601: IVSSILSPAP SSAQANEKRK ARPSFMAGNC FTPESKRKGA DDPVRDLKKV VKGLEAEIER LKKDHVLQIK QKDDTIRELS RKSAKPAGGT QVGGVKRIVT
701: RASLRPREPH DVHLKSPSHR FHSPAPTAKK RSFWDITTAN SPSVVTLNGR KTRSHVNTET VAAPSMLLQP GFARQNVKH

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.