Factsheet for Bra025894.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010432.1-P
Bra026415.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18550.1	Bra010432.1-P	AT4G26630.1	25387881
AT1G18550.1	Bra026415.1-P	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26149	Canola	nucleus	99.29	96.8
CDY19223	Canola	nucleus	97.15	94.58
AT1G18550.1	Thale cress	nucleus	85.16	82.34
KRH62967	Soybean	nucleus	56.92	64.35
VIT_17s0000g04330.t01	Wine grape	cytosol	67.62	62.29
KRH56713	Soybean	cytosol, plastid	63.62	60.93
KRH03839	Soybean	nucleus	63.62	60.27
GSMUA_Achr6P13660_001	Banana	cytosol	58.06	59.68
Zm00001d042644_P001	Maize	cytosol	26.39	58.54
Solyc03g114380.2.1	Tomato	cytosol	64.48	58.02
PGSC0003DMT400062969	Potato	cytosol	64.48	56.43
Zm00001d048931_P001	Maize	nucleus	27.96	56.0
Os01t0605500-00	Rice	plastid	60.48	54.64
TraesCS3D01G218300.1	Wheat	plastid	59.91	54.05
HORVU3Hr1G052930.1	Barley	plastid	59.2	53.97
TraesCS3B01G246600.1	Wheat	plastid	59.77	53.72
TraesCS3A01G214700.1	Wheat	plastid	59.49	53.32
Zm00001d044420_P001	Maize	mitochondrion	57.63	51.66
EES03243	Sorghum	mitochondrion	57.2	51.48
Bra023192.1-P	Field mustard	cytosol	21.11	22.53
Bra021158.1-P	Field mustard	cytosol	21.68	22.42
Bra027194.1-P	Field mustard	cytosol	21.83	22.21
Bra019606.1-P	Field mustard	cytosol, mitochondrion	25.25	21.91
Bra021186.1-P	Field mustard	cytosol	23.54	20.94
Bra022171.1-P	Field mustard	cytosol	23.82	19.74
Bra009596.1-P	Field mustard	plastid	16.26	19.45
Bra012755.1-P	Field mustard	cytosol	22.68	19.32
Bra005719.1-P	Field mustard	cytosol	15.55	18.2
Bra026476.1-P	Field mustard	plastid	12.27	13.46
Bra009714.1-P	Field mustard	plastid	12.13	12.96

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	EnsemblPlantsGene:Bra025894	EnsemblPlants:Bra025894.1	EnsemblPlants:Bra025894.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
UniProt:M4EAT5	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF16796	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF557	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000253F44F
InterPro:Vik1/Cik1_MT-bd	SEG:seg	:	:	:	:

Description

AT1G18550 (E=1e-155) | ATP binding / microtubule motor

Coordinates

chrA06:-:7116111..7118763

Molecular Weight (calculated)

79065.0 Da

IEP (calculated)

10.305

GRAVY (calculated)

-0.704

Length

701 amino acids

Sequence
(BLAST)

001: MPVSTRSKAI MNHEQSRRQE YTNPHQGLKE KMRALTLLYE QQKRASFSLR NNPNHLHHSP KPQDLRFKPP EMLDSCKKLH KDPNFADDET KENNVADADL
101: VFGTNTAPVK SSTVIRKLSM GNGAEKGENF EACGGSRIMV FVRLRPMGKK ERENGSRCCV KVLNKRDVYL TEFTNDNDYL RLKRLRVRHF TFDSSFPETT
201: TQREVYSTTT GDLLEAVLEG RNGSVFCYGA TGAGKTYTML GTMENPGVMV LAIKDLFAKV RERSLDGNHT VHLSYLEVYN ETVRDLLSPG RPLILREDKQ
301: VMALLQRGNQ NRTTEPTRCN ETSSRSHAIL QVVVEYKTRD GSMNVISRVG KLSLIDLAGS ERAIATDQRT LRSLEGANIN RSLLALSSCI NALVEGKKHI
401: PYRNSKLTQL LKDSLGGSCN TVMIANISPS NHSFGETQNT LHWADRAKEI RVKGCEVNEE VVVQVSEGPD QAKLVLELQE ENRELRVKLV EQEQKVLTLE
501: AETIAAANNN ISPTPPSISS LMTPPSALTA QQKKKPRHSL LSGTCFTPES SKRRKAEDAV KELQLTVKAL KMEMERMKRE HVVQMKKQKE ELMKELCSKK
601: SEKTPERGKE TTTRRIVTRG SLRPKEREKE LIKSPSHRFA SPAAPAKKRS FWDITVANSP SLDRRKTRSH VLPVNQEAPS MLLQPGFARP RTTTTTTQKK
701: H

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.