CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18550.1	EER91265	AT4G26630.1	25387881
AT1G18550.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044420_P001	Maize	mitochondrion	88.83	88.49
Zm00001d042644_P001	Maize	cytosol	33.89	83.54
Zm00001d048931_P001	Maize	nucleus	34.15	76.0
Os01t0605500-00	Rice	plastid	73.43	73.71
HORVU3Hr1G052930.1	Barley	plastid	70.47	71.39
TraesCS3D01G218300.1	Wheat	plastid	71.12	71.3
TraesCS3A01G214700.1	Wheat	plastid	71.5	71.23
TraesCS3B01G246600.1	Wheat	plastid	70.6	70.51
GSMUA_Achr6P13660_001	Banana	cytosol	55.84	63.78
KRH62967	Soybean	nucleus	50.71	63.71
KRH56713	Soybean	cytosol, plastid	57.12	60.79
KRH03839	Soybean	nucleus	57.12	60.14
VIT_17s0000g04330.t01	Wine grape	cytosol	57.51	58.87
AT1G18550.1	Thale cress	nucleus	54.3	58.34
CDY19223	Canola	nucleus	53.4	57.78
CDY26149	Canola	nucleus	52.89	57.3
Bra025894.1-P	Field mustard	nucleus	51.48	57.2
Solyc03g114380.2.1	Tomato	cytosol	57.12	57.12
PGSC0003DMT400062969	Potato	cytosol	56.87	55.31
KXG37461	Sorghum	cytosol	24.65	26.48
EES01102	Sorghum	cytosol	20.8	23.18
EES18348	Sorghum	plastid	17.07	21.98
EES00727	Sorghum	cytosol, mitochondrion	21.82	21.46
EES17741	Sorghum	cytosol	21.31	20.52
KXG22514	Sorghum	plastid	9.63	9.47

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	UniProt:C5XQB5	ncoils:Coil	EnsemblPlants:EES03243	ProteinID:EES03243
ProteinID:EES03243.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF557	SMART:SM00129	EnsemblPlantsGene:SORBI_3003G212800
SUPFAM:SSF52540	UniParc:UPI0003C6FD4E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:54724620..54729268

Molecular Weight (calculated)

85104.2 Da

IEP (calculated)

10.405

GRAVY (calculated)

-0.563

Length

779 amino acids

Sequence
(BLAST)

001: MPVVTRSRVS AARGDGAGAL PWGSASAAPA PRHVASQSHH NHHGLKEKLR ALTQDYEQQK QKQLLAASQG GGAAARQLRQ SIRCLNAAQV ANDENAEEED
101: EEDGGRVAKR RYDAFGLVPE AAVLRENVAP PQARAPSNDS HAVVLARQAK DNVVGRGANA MSCPTKKTVP ALPVLPVPTA RKLSLGGAVG GKLKAAGEVG
201: AGTAETVESR ILVFVRLRPM SRKEKEAGSR SCVKIVNRKE VSLTEFASEN DYLRLKRVRD SQFCFDSVFP DSTTQAEVYS TSTADLVEGV LQGRNGTVFC
301: YGATGAGKTY TMLGTMENPG VMVLAINDLF SKVTQRNYSI KLSYLEIYNE TVRDLLSPGS PLNLREDKQQ GTVAAGLTQR SVYSTDEVME LLQKGNKNRT
401: TEPTRVNETS SRSHAVLQVV VEYRSLDGTN LKRVGKLSLI DLAGSERALA TDQRTLRSIE GANINRSLLA LSSCINALVE GKKHIPYRNS KLTQLLKDSL
501: GGSCNTVMIA NISPSHLSFG ETQNTLHWAD RAKEIKTKTQ TTANEEVLDQ PDSETAVLVL ELQRENCVLR EQLAKQQQKL LIAEAQLLAS KTLPQQSPAR
601: SSHVSTPGST QRKTRRSIVA GNYFNTTDSK RPTTDNAQVR ELQRKVKTLE SEMDKMKKEH ILQLKQKDEF IRGLINRKAP NNCEEATVDR RVVTRASLRK
701: AQRDASATGE LKSPSHRFTS PAPTAKKRTF WDIGGNSPSV LAANGRKTRS HVATETPKKG SSKLLQPGFA RQISSHRNI

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.