Factsheet for AT1G18550.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19223	Canola	nucleus	85.24	85.83
CDY26149	Canola	nucleus	85.1	85.81
Bra025894.1-P	Field mustard	nucleus	82.34	85.16
KRH62967	Soybean	nucleus	58.34	68.23
VIT_17s0000g04330.t01	Wine grape	cytosol	70.34	67.02
KRH56713	Soybean	cytosol, plastid	65.38	64.75
KRH03839	Soybean	nucleus	65.1	63.78
GSMUA_Achr6P13660_001	Banana	cytosol	59.31	63.05
Zm00001d042644_P001	Maize	cytosol	27.45	62.97
Solyc03g114380.2.1	Tomato	cytosol	66.48	61.87
PGSC0003DMT400062969	Potato	cytosol	66.34	60.05
Zm00001d048931_P001	Maize	nucleus	28.97	60.0
Os01t0605500-00	Rice	plastid	62.07	57.99
HORVU3Hr1G052930.1	Barley	plastid	59.72	56.31
TraesCS3D01G218300.1	Wheat	plastid	60.28	56.24
TraesCS3B01G246600.1	Wheat	plastid	60.0	55.77
TraesCS3A01G214700.1	Wheat	plastid	59.86	55.5
EES03243	Sorghum	mitochondrion	58.34	54.3
Zm00001d044420_P001	Maize	mitochondrion	58.21	53.96
AT3G16060.1	Thale cress	cytosol	22.34	23.68
AT3G49650.1	Thale cress	cytosol	26.21	23.37
AT3G16630.1	Thale cress	cytosol	22.62	20.65
AT5G02370.1	Thale cress	cytosol	14.9	19.15
AT5G23910.2	Thale cress	cytosol	13.79	14.18
AT4G15885.1	Thale cress	nucleus	1.79	11.5

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	EntrezGene:838436	UniProt:A0A178W9U1	ProteinID:AAF98419.1	ProteinID:AEE29728.1
ArrayExpress:AT1G18550	EnsemblPlantsGene:AT1G18550	RefSeq:AT1G18550	TAIR:AT1G18550	RefSeq:AT1G18550-TAIR-G	EnsemblPlants:AT1G18550.1
TAIR:AT1G18550.1	ncoils:Coil	UniProt:F4ICA0	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	RefSeq:NP_173290.4
ProteinID:OAP14143.1	InterPro:P-loop_NTPase	PFAM:PF00225	PO:PO:0000005	PO:PO:0000293	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF557	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI0001A7B1A2	SEG:seg	:	:	:	:

Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]

Coordinates

chr1:-:6381441..6384587

Molecular Weight (calculated)

81774.1 Da

IEP (calculated)

10.301

GRAVY (calculated)

-0.683

Length

725 amino acids

Sequence
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.