Factsheet for GSMUA_Achr6P13660_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18550.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62967	Soybean	nucleus	62.9	69.19
Zm00001d042644_P001	Maize	cytosol	31.09	67.09
VIT_17s0000g04330.t01	Wine grape	cytosol	70.38	63.07
Os01t0605500-00	Rice	plastid	70.67	62.11
KRH56713	Soybean	cytosol, plastid	66.42	61.89
Zm00001d048931_P001	Maize	nucleus	31.38	61.14
HORVU3Hr1G052930.1	Barley	plastid	68.77	60.99
TraesCS3D01G218300.1	Wheat	plastid	69.21	60.75
KRH03839	Soybean	nucleus	65.69	60.54
TraesCS3B01G246600.1	Wheat	plastid	69.06	60.38
TraesCS3A01G214700.1	Wheat	plastid	69.21	60.36
Solyc03g114380.2.1	Tomato	cytosol	68.04	59.56
AT1G18550.1	Thale cress	nucleus	63.05	59.31
CDY26149	Canola	nucleus	62.17	58.97
CDY19223	Canola	nucleus	61.88	58.61
PGSC0003DMT400062969	Potato	cytosol	68.48	58.3
Bra025894.1-P	Field mustard	nucleus	59.68	58.06
Zm00001d044420_P001	Maize	mitochondrion	64.08	55.88
EES03243	Sorghum	mitochondrion	63.78	55.84
GSMUA_Achr4P32130_001	Banana	mitochondrion	28.15	25.6
GSMUA_Achr7P14340_001	Banana	cytosol	21.85	23.39
GSMUA_Achr8P15940_001	Banana	cytosol	23.46	22.99
GSMUA_Achr2P01660_001	Banana	cytosol	23.61	20.33
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	19.06	20.0
GSMUA_Achr11P...	Banana	cytosol	23.61	19.63
GSMUA_Achr5P02020_001	Banana	mitochondrion	28.59	16.74
GSMUA_Achr4P11680_001	Banana	cytosol	12.9	13.71

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G13660_001	EnsemblPlants:GSMUA_Achr6P13660_001	EnsemblPlants:GSMUA_Achr6T13660_001
InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
UniProt:M0T6R4	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF557	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002965108	SEG:seg

Description

kinesin motor domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G13660_001]

Coordinates

chr6:-:9093514..9097232

Molecular Weight (calculated)

75447.9 Da

IEP (calculated)

10.218

GRAVY (calculated)

-0.592

Length

682 amino acids

Sequence
(BLAST)

001: MPVSTRSQIS IGRNEPASAD HDREGQRARA RLLRDPHHGL REKMRALTLL YEQHRNERDP IQKENANRGL AATTGKLSLR ELISDGAQSD GWVGRSKVGG
101: DQLGAVAAEN REAPGSRILV FVRLRPMAKK EKDAGSRCCV KIVNRKDVYL TEFASETDYL RLKRVRGRHF CFDSSFPDST PQQEVYATTT ADLVEGVLQG
201: RNGSVFCYGA TGAGKTYTML GTVENPGVMV LAIKDLFSKI RQRSYDGDHS VQLSYLEVYN ETVRDLLSPG RPLVLREDKQ GIVAAGLTQY RAYTTDEVMT
301: LLQQGNQNRT TEPTRANETS SRSHAILQVV AEYKCNDSGT IVRRIGKLSL IDLAGSERAL ATDQRTQRSI EGANINRSLL ALSSCINALV EGKKHIPFRN
401: SKLTQLLKDS LGGQCNTVMI ANISPSNLSF GETQNTLHWA DRAKEIRTKG CAANEESSIQ VPDSEVDQAK LILELQKENS ELRQQLVRHQ QKMLTIQAQS
501: LAASPAPSIA PPSSVLSTPC STQRKVKRSI LSANCFSTPE SKNRANDDTV VQGLKKTVKA LKDEIEKLKK EHVLQLKQKD DFIRDLITKY GLKPSEGQRE
601: KRVGTRSSLR RGEKSAAETG ELKSPNHRFT SPVPTAKKRS FWDITTGNSP SVVALNGRKT RSHVAAEAHA TPSMLLQVQI SK

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.