Factsheet for TraesCS3B01G246600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18550.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT1G18550.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT1G18550.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G218300.1	Wheat	plastid	97.56	97.94
TraesCS3A01G214700.1	Wheat	plastid	97.56	97.31
HORVU3Hr1G052930.1	Barley	plastid	93.21	94.54
Os01t0605500-00	Rice	plastid	77.95	78.35
EES03243	Sorghum	mitochondrion	70.51	70.6
Zm00001d044420_P001	Maize	mitochondrion	70.13	69.95
Zm00001d042644_P001	Maize	cytosol	28.21	69.62
GSMUA_Achr6P13660_001	Banana	cytosol	60.38	69.06
KRH62967	Soybean	nucleus	52.56	66.13
Zm00001d048931_P001	Maize	nucleus	28.97	64.57
KRH56713	Soybean	cytosol, plastid	58.08	61.89
KRH03839	Soybean	nucleus	58.21	61.35
VIT_17s0000g04330.t01	Wine grape	cytosol	59.62	61.1
CDY26149	Canola	nucleus	55.51	60.22
CDY19223	Canola	nucleus	55.38	60.0
AT1G18550.1	Thale cress	nucleus	55.77	60.0
Bra025894.1-P	Field mustard	nucleus	53.72	59.77
Solyc03g114380.2.1	Tomato	cytosol	58.46	58.54
PGSC0003DMT400062969	Potato	cytosol	58.72	57.18
TraesCS5B01G412300.1	Wheat	cytosol, mitochondrion	24.87	27.25
TraesCS3B01G255500.1	Wheat	cytosol	20.9	23.22
TraesCS1B01G293500.1	Wheat	plastid	16.41	22.22
TraesCS1B01G123200.1	Wheat	cytosol	21.79	21.07
TraesCS3B01G223900.2	Wheat	cytosol	21.28	20.99

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF557	SMART:SM00129
SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3B01G246600	EnsemblPlants:TraesCS3B01G246600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:-:392297832..392301292

Molecular Weight (calculated)

85787.4 Da

IEP (calculated)

10.398

GRAVY (calculated)

-0.621

Length

780 amino acids

Sequence
(BLAST)

001: MPVSTRSQAS AIKGGDPGAR QWSSSAARVP ISAPGRDAAG RRASLLPNTH HGLKEKMRAL NLFYEQHKQM LASSQGGAAM RRSRTIPHAN VGEDRDENAQ
101: EEEEEEGEGA KRHHDAFAPL REAAVLRENM GPPEARAPSK NDKVVVFSRP PEPKEKENVA LAANVMSCPV KKAAPALPAL QARKLSLGGG IGGKIKAIGE
201: MGAANADATG SRIMVFVRLR PMSRKEKEAG SKTCVKIVNK KDVYLTELAS ENDYLRLKRV RGRHFCFDAS FPDSTAQAEV YSTSTADLVE GVLQGRNGTV
301: FCYGATGAGK TYTMLGTMDN PGVMVLAIKD LFLKVRQRSY DGSHSIQLSY LEVYNETVRD LLSPGRPLLL REDKQQGTVA AGLTQYRAYS TDEVMKLLQQ
401: GNQNRTTEPT RVNETSSRSH AILQVVVEYR YMDGTSVVTR VGKLSLIDLA GSERAIATDQ RSQRSLEGAN INRSLLALSS CINALVEGKR HVPYRNSKLT
501: QLLKDSLGGS CNTVMIANIS PSNLSFGETQ NTLHWADRAK EIKTKPLTAG NEEVFKAPDS DTDQAKLVLE LQKENSELRQ QVVKQQQKLL TVQAQSLAPN
601: GSPQQCAPPS PHITTTPCST QRKVKRSILD RSCFSTPNSK RPADNTMVRD LQRKVKTLVS EMEKMKKEHF LQLKQRDEFI RGLINRKNSN DPEPATAERR
701: VITRASLRKA EKDAGELKSP SHRFTSPMPT AKKRTFWDFG GESPSVLAGN GRKTRSHVAA ETPTRAPSML LQPGFTRQRA

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.