Factsheet for Zm00001d044420_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18550.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT1G18550.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042644_P001	Maize	cytosol	37.08	91.77
EES03243	Sorghum	mitochondrion	88.49	88.83
Zm00001d048931_P001	Maize	nucleus	36.96	82.57
Os01t0605500-00	Rice	plastid	72.89	73.45
HORVU3Hr1G052930.1	Barley	plastid	69.82	71.0
TraesCS3D01G218300.1	Wheat	plastid	70.33	70.79
TraesCS3A01G214700.1	Wheat	plastid	70.59	70.59
TraesCS3B01G246600.1	Wheat	plastid	69.95	70.13
GSMUA_Achr6P13660_001	Banana	cytosol	55.88	64.08
KRH62967	Soybean	nucleus	50.26	63.39
KRH56713	Soybean	cytosol, plastid	56.91	60.79
KRH03839	Soybean	nucleus	56.91	60.14
VIT_17s0000g04330.t01	Wine grape	cytosol	57.8	59.4
AT1G18550.1	Thale cress	nucleus	53.96	58.21
CDY19223	Canola	nucleus	53.45	58.06
CDY26149	Canola	nucleus	53.2	57.86
Bra025894.1-P	Field mustard	nucleus	51.66	57.63
Solyc03g114380.2.1	Tomato	cytosol	57.29	57.51
PGSC0003DMT400062969	Potato	cytosol	57.29	55.93
Zm00001d034239_P001	Maize	cytosol	24.81	27.25
Zm00001d011405_P001	Maize	cytosol	20.2	23.17
Zm00001d044170_P001	Maize	cytosol	20.08	22.36
Zm00001d010525_P001	Maize	plastid	16.24	21.56
Zm00001d009233_P006	Maize	cytosol, mitochondrion	21.36	20.17
Zm00001d037599_P001	Maize	extracellular	20.46	19.9
Zm00001d009840_P001	Maize	cytosol, mitochondrion	21.1	19.86
Zm00001d038961_P002	Maize	plastid	9.34	9.0

Protein Annotations

EntrezGene:100285143	MapMan:20.1.3.7	Gene3D:3.40.850.10	UniProt:B6U192	EMBL:BT066016	ncoils:Coil
EMBL:EU971007	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	ProteinID:ONM41094.1	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF557	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000182E828
EnsemblPlantsGene:Zm00001d044420	EnsemblPlants:Zm00001d044420_P001	EnsemblPlants:Zm00001d044420_T001	SEG:seg	:	:

Description

ATP binding microtubule motor family protein

Coordinates

chr3:-:227506923..227511292

Molecular Weight (calculated)

85470.5 Da

IEP (calculated)

10.387

GRAVY (calculated)

-0.576

Length

782 amino acids

Sequence
(BLAST)

001: MPVVTRSRLS AARGDGAGAL PWGSASAAPA LRHDAGAPRE GVASKNHHHH HGLKEKLRAL TQDYEQQKQK LAASQLRRSI RCLNAWEAIN DENAEEEEDG
101: GRVAKFRYDA FAQVPESAVL RENVAPPQAR APSNDGAVLA RTTEPQAKEN AVGRGANAMS CPIKKAVPAL PVLPVPPARK LSLGGAVGGK LKAAGEVGAG
201: TAEAAESRIL VFVRLRPMSR KEKEAGSRSC VKIVNRKEVF LTESASENDY LRLKRGRDSH FCFDSVFPDS TTQAEVYSTS TADLVEGVLQ GRNGTVFCYG
301: ATGAGKTYTM LGTMENPGVM VLAINDLFSK VTQKYHSIKL SYLEIYNETV RDLLSPGSPL NLREDKQGIV AAGLTQRSVY STDEVMELLQ KGNKNRTTEP
401: TRVNETSSRS HAVLQVVVEY RSLDGVNVKR AGKLSLIDLA GSERALATDQ RTQRSIEGAN INRSLLALSS CINALVEGKK HIPYRNSKLT QLLKDSLGGA
501: CNTVMIANIS PSNLSFGETQ NTLHWADRAK EIKTKTQQTT VNEEVLDQPD SETMLVLELQ KENRVLREQL AKQQQKLLTA EAQLLASKTS PQRSPAPSSH
601: VSTPGSTQRK TRRSILAAGG GNYFSTLDSK RHAADNAQVR ELQRKVSTLE SEIEKMKKEH LLQLKRKDEF IRDLINRKDP NNNSEETATV DRRVVTRASV
701: RKAQRDASAA VELKSPSRVF TSPAPTAKKR TFWDIGGNSP SVLAANGRKT RSHVATETPK KASSKLLQPG FARQTSTHQR FT

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.