Factsheet for HORVU3Hr1G052930.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18550.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G218300.1	Wheat	plastid	94.8	93.82
TraesCS3A01G214700.1	Wheat	plastid	94.93	93.35
TraesCS3B01G246600.1	Wheat	plastid	94.54	93.21
Os01t0605500-00	Rice	plastid	78.02	77.32
Zm00001d042644_P001	Maize	cytosol	29.52	71.84
EES03243	Sorghum	mitochondrion	71.39	70.47
Zm00001d044420_P001	Maize	mitochondrion	71.0	69.82
GSMUA_Achr6P13660_001	Banana	cytosol	60.99	68.77
KRH62967	Soybean	nucleus	53.45	66.29
Zm00001d048931_P001	Maize	nucleus	30.17	66.29
KRH56713	Soybean	cytosol, plastid	59.04	62.02
KRH03839	Soybean	nucleus	58.78	61.08
VIT_17s0000g04330.t01	Wine grape	cytosol	59.95	60.58
AT1G18550.1	Thale cress	nucleus	56.31	59.72
CDY26149	Canola	nucleus	55.79	59.67
CDY19223	Canola	nucleus	55.66	59.44
Bra025894.1-P	Field mustard	nucleus	53.97	59.2
Solyc03g114380.2.1	Tomato	cytosol	59.56	58.79
PGSC0003DMT400062969	Potato	cytosol	59.82	57.43
HORVU1Hr1G022270.1	Barley	cytosol, mitochondrion	7.15	35.95
HORVU5Hr1G098780.4	Barley	mitochondrion	23.93	25.34
HORVU3Hr1G081700.1	Barley	cytosol	3.9	24.39
HORVU1Hr1G072370.1	Barley	plastid	16.52	21.9
HORVU5Hr1G080740.1	Barley	cytosol	3.25	21.74
HORVU3Hr1G042330.10	Barley	cytosol, plastid	22.37	18.98
HORVU1Hr1G022250.2	Barley	plastid	15.99	13.76
HORVU7Hr1G000860.1	Barley	cytosol	12.22	8.99

Protein Annotations

MapMan:20.1.3.7	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:HORVU3Hr1G052930	EnsemblPlants:HORVU3Hr1G052930.1	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M0XB97
InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115
PANTHER:PTHR24115:SF557	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002952612	SEG:seg	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:M0XB97]

Coordinates

chrchr3H:+:387315328..387319326

Molecular Weight (calculated)

84364.5 Da

IEP (calculated)

10.432

GRAVY (calculated)

-0.609

Length

769 amino acids

Sequence
(BLAST)

001: MPVSTRSQAS ATKGGDLGAH PWSSSAARVP MSAPGRRASL LTNTHHGLKE KMRELNLFYE QHKQILASSQ AGAAMRRSRT IPHANVGEDR DENAGEGEGA
101: KRHRDAFAPL PEAAVLRENM GHPDARPPSK NGNVVVFSRP PEPREKENVA HAANVMSCPV KKGAPALPAL QARKLSLGGG IGGKLKALGE MGAANADSTG
201: SRILVFVRLR PMSRKEKEAG SNTCVKIVNK KDVYLTELAS ENDYLRLKRV RGRHFCFDAS FPDSTAQAEV YSTSTADLVE GVLQGRNGTV FCYGATGAGK
301: TYTMLGTMEN PGVMVLAIKD LFLKVRQRSY DGSHSIQLSY LEVYNETVRD LLSPGRPLLL REDKQQGTVA AGLTQYRAYS TDEVMELLQQ GNQNRTTEPT
401: RVNETSSRSH AILQVVVEYR YMDGTSVVTR VGKLSLIDLA GSERAIATDQ RSQRSLEGAN INRSLLALSS CINALVEGKK HVPYRNSKLT QLLKDSLGGS
501: CNTVMIANIS PSNLSFGETQ NTLHWADRAK EIKTKPLTAG NEEVFKAPDS DTEQAKLVLE LQKENSELRQ QVVKQQHKLL TVQAQSLAPN GSPQQAAPSP
601: HITTTPCSTQ RKAKRSILDG SCFSTPNSKR PADIGQVRDL QRKVKTLESE IEKMKREHFL QLKQRDEFIR GLINRKNSND PESATAERRV IRRASLRKAE
701: KDAGELKSPS HRFTSPIPTA KKRTFWDFGG ESPSVLAGNG RKTRSHVAAE TPTRAPSMLL QPGFTRQRA

Best Arabidopsis Sequence Match ( AT1G18550.1 )
(BLAST)

001: MPVSTRSKVM KQERNEQENT NLNLPLRNPH QGLKEKMRAL TLLYEQQKRA SFSLRNPNHN QSPKPEDQRF KTQLLDSSKK GDRFHRLDGK DSTFVEEDTK
101: ENNVFEADRI FGVSSVPVKP SGVIRKLSMG NGARNVSEAE KLESLNASVS RILVFVRLRP MGKKERENGS RCCVKVLNKR DVYLTEFTNE NDYLRLKRLR
201: VRHFTFDSSF PETTTQQEVY STTTGDLVEA VLEGRNGSVF CYGATGAGKT YTMLGTMENP GVMVLAIKDL FAKVRQRSLD GNHVVHLSYL EVYNETVRDL
301: LSPGRPLILR EDKQGIVAAG LTQYRAYSTD EVMALLQRGN QNRTTEPTRC NETSSRSHAI LQVIVEYKTR DASMNIISRV GKLSLIDLAG SERALATDQR
401: TLRSLEGANI NRSLLALSSC INALVEGKKH IPYRNSKLTQ LLKDSLGGSC NTVMIANISP SSQSFGETQN TLHWADRAKE IRVKECEVNE EVVQVGEEEG
501: ADQAKLLLEL QKENSELRVQ LAKQQQKLLT LQAENIAAAN NNNNISLTPP SISSLMTPPS ALTAQQKKKP RHSLLSGTCF TPESLKRTKA EEAVKELQLT
601: VKALKMEMER MKREHGLQMK KQKDELMKDL CSRKSEKTPE RCKETRRIVT RGSLRPKEKE KELKSPSHRF ASPVAAAKKR SFWDITVANT SPALDRRKTR
701: SHGLVHQEAP SKLLQPGFAR PHMKH

Arabidopsis Description

KIN8AKinesin-like protein KIN-8A [Source:UniProtKB/Swiss-Prot;Acc:F4ICA0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.