CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038961_P002	Maize	plastid	64.52	63.01
Os04t0375900-01	Rice	cytosol	43.81	47.8
HORVU7Hr1G000860.1	Barley	cytosol	40.91	30.98
GSMUA_Achr4P11680_001	Banana	cytosol	23.86	29.44
KRH38442	Soybean	cytosol	25.13	28.97
VIT_16s0050g00670.t01	Wine grape	plastid	23.48	28.93
KRH08928	Soybean	cytosol	25.63	28.27
PGSC0003DMT400040835	Potato	plastid	21.84	28.22
Solyc03g025470.2.1	Tomato	cytosol, plastid	23.36	27.69
Bra026476.1-P	Field mustard	plastid	22.22	27.54
CDX80396	Canola	cytosol, plastid	24.24	26.85
Bra009714.1-P	Field mustard	plastid	22.1	26.68
CDX88057	Canola	cytosol	23.36	26.39
AT5G23910.2	Thale cress	cytosol	23.48	26.38
CDY16872	Canola	plastid	23.48	26.31
CDX87151	Canola	plastid	23.36	26.17
EES18348	Sorghum	plastid	19.19	25.12
EES01102	Sorghum	cytosol	11.87	13.45
KXG37461	Sorghum	cytosol	10.73	11.72
EES00727	Sorghum	cytosol, mitochondrion	10.73	10.73
EES17741	Sorghum	cytosol	10.61	10.38
EES03243	Sorghum	mitochondrion	9.47	9.63

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	UniProt:A0A1B6P9X0	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752
InterPro:IPR036961	EnsemblPlants:KXG22514	ProteinID:KXG22514	ProteinID:KXG22514.2	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF12836	PFscan:PS50067	PANTHER:PTHR24115
PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like	SMART:SM00129	EnsemblPlantsGene:SORBI_3009G226800	SUPFAM:SSF47781	SUPFAM:SSF52540
UniParc:UPI000B8BA946	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:56819412..56824236

Molecular Weight (calculated)

86924.8 Da

IEP (calculated)

9.698

GRAVY (calculated)

-0.460

Length

792 amino acids

Sequence
(BLAST)

001: MAPPPSPIRF KLAPPPVRTR CHPAPPAPPP RLGTQFKRRR GQRQRRSSSS LTTASTHKTD PLFLLSGAVV VIPCIRPRKN NEGEALLLPR RQRTMEEAAA
101: AAAAATAAPS PCPRTAPVRV VARICPGGGP SGSFHVAARV PDPANSSSAS VSFIPVSKEA APSGSMTPHK QREYKLDWCY LNQDSDTHIF QNEVKHLVDN
201: IFSGDGRNHA CVITCGSTAK TNLVMGFEDH PGLLIMAMER ILDCAKPIGA TIRVSSYQVL QDNHVFDLLE PKDSEVFVRE DANGRTHLKG LSKVGINSIQ
301: EFQNLCYGSD KLQNPTIASN QTSGHRGFII FISRFDQNGR QRSVANMHFL ELAGYNNNKQ KSQGGGFAQP NSKKSLYAVM DVVQALNSHQ SFIPYRKSKV
401: THILQDSLCK TSDALLIACL DEVSCQDVVS TLSLASRSSQ VVNDQCYNLS LSTKDCLKSN VNLSINTKNL SRSLLPSTQQ RSSIVEKSDK TQFNNSAVKA
501: ARALNANKRS ETSTHSVKKT STQSASISLK HSAAKSILRG RNLFFPTANS SKEDMKNLVT TAIVRPKEVE TSSGMEIQAL PPIEEKCDDT KNSVISSKME
601: KVEPCSMREI VLSDMKEEGH SSSTENFVAD SSMTYPSTAA DKSVEKNPTN VIQSSPKISD QLREISNSLK LLSTMPSSIK TDIVRAKPFD IVEAEPKTPE
701: IHLKVRHVED LQESGFKKSL AKECLSFINS ASKEQLKSLK GIGEKRANFI LELREESPEP LKEIDDLRSI VGMNKKEINK MVSKMVLESK MD

Best Arabidopsis Sequence Match ( AT5G23910.1 )
(BLAST)

001: MTSHGRKVVR VVARVKPSTD LASTKSISVQ KPMGDDSETV TISFGAQFAG SKDSYRLDYC YEENETTGSI LTKEIKPLIS TVFEGKDANV IAHGARNSGK
101: THLIQGNERE LGLAVLTMSE MLSMAEERGD AIFVSVYEVS QETVYDLLDQ EKRVVSVLEG AQGKIQLKGL SQVPVKSLSE FQNLYFGFKK SQKLTSDLPT
201: RSHKGVMIHV TTGNANSGSL GRMNFLDMAG YEDSRKQNSA LGPLEIARVN KSIYALQNVM YALNANESHV PYRESKLTRM LKDCLKGSNI TLLITCLPRE
301: FSQDSFYMLN LASRICLGGN RAITNPTKKK INGLDRSVSL SSAAQRRQTP LTMSAASRKQ TVLRGNVTER KTKINTATSA IKARKLFGEA NDSVKCKNSS
401: KKVEGKAKMV LKKGISTSKV VLSVQASSPK EEICSSITVT DFQSSLVEEE YSLAFSSSTV AMEPGYSNGA SLSSEAIYTT DKETPRKQEE MFAGATHCDD
501: AFVDKAQIVE RDENNSVIEE DLTLVIDEGE NLDKENNSLL ANETASPPLS MRLQELSNNL KSICKFSNQL SVPEKHQTPL TILQAEEASE HSDITAEAAV
601: SIELRTPEKT MPSNIGCSPW KTYSAHSSKL KNSAVGEYLK FINTAGKEDL KKLKGIGDKR AAYIVELREE SPFKTLDDLQ SIGLSAKQVN GLLKKEIGEI
701: F

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G23910]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.