CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010525_P001	Maize	plastid	86.28	88.62
Os05t0459400-01	Rice	cytosol, plastid	74.21	76.88
TraesCS1B01G293500.1	Wheat	plastid	71.07	74.65
TraesCS1D01G283300.1	Wheat	plastid	71.41	74.1
HORVU1Hr1G072370.1	Barley	plastid	70.91	73.97
TraesCS1A01G284300.2	Wheat	plastid	70.08	72.85
HORVU3Hr1G081700.1	Barley	cytosol	13.22	65.04
PGSC0003DMT400022781	Potato	cytosol	42.48	58.95
VIT_08s0032g01060.t01	Wine grape	cytosol	30.41	56.62
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	58.84	54.77
VIT_09s0054g00130.t01	Wine grape	cytosol	33.39	51.14
VIT_19s0015g01710.t01	Wine grape	cytosol	30.25	51.12
VIT_08s0007g00340.t01	Wine grape	plastid	55.54	50.99
VIT_03s0132g00430.t01	Wine grape	cytosol	39.83	50.74
CDY62566	Canola	plastid	51.24	50.74
KRG99933	Soybean	plastid	53.72	50.62
Bra009596.1-P	Field mustard	plastid	48.59	50.17
CDY40350	Canola	plastid	50.58	50.16
Bra005719.1-P	Field mustard	cytosol	49.42	49.92
KRH49096	Soybean	plastid	52.89	49.84
AT5G02370.1	Thale cress	cytosol	46.12	49.47
Solyc09g010810.2.1	Tomato	cytosol	53.06	49.38
CDX80816	Canola	cytosol, plastid	49.42	49.26
CDY55558	Canola	cytosol	48.26	49.08
KXG37461	Sorghum	cytosol	23.14	19.31
KXG22514	Sorghum	plastid	25.12	19.19
EES01102	Sorghum	cytosol	20.66	17.88
EES03243	Sorghum	mitochondrion	21.98	17.07
EES00727	Sorghum	cytosol, mitochondrion	20.17	15.4
EES17741	Sorghum	cytosol	19.5	14.59

Protein Annotations

Gene3D:1.10.150.280	MapMan:20.1.3.9	Gene3D:3.40.850.10	EntrezGene:8072545	UniProt:C5YZ95	EnsemblPlants:EES18348
ProteinID:EES18348	ProteinID:EES18348.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PFAM:PF12836	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550
InterPro:RuvA_2-like	SMART:SM00129	EnsemblPlantsGene:SORBI_3009G163100	SUPFAM:SSF47781	SUPFAM:SSF52540	unigene:Sbi.11541
UniParc:UPI0001A888F3	RefSeq:XP_002439918.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:51982858..51988147

Molecular Weight (calculated)

66856.2 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.360

Length

605 amino acids

Sequence
(BLAST)

001: MAGTSTPARS SAHPMAATST PARYRSSARS SLPVRIVLRV RPFLPSEAAS ATAPCVSLLS GHPGGEVTVH LKDQHTSRSE LYKVDSFFGQ EDSVSQIFDQ
101: EVRAVIPGIF EGINATVFAY GAIGSGKTYT MQGTEDFPGL IPLAASTILA HCTGTWCSVE ISYYEVYMER CYDLLEPKAK EIMALDDKDG NMQLKGLSWV
201: PVRSMEEFEE LYSIGVQRRK VAHTGLNDVS SRSHAVLSLR VSTDVMKGKL NLIDLAGSED NKRTLNEGIR LQESSKINQS LFALSNVFSA LNKNEHRIPY
301: RESKLTRILQ DSLGGSSRAV MIACLNPAEY QESANTVSLA ARSCHIETFT SSSKQETPKV KVDMEAKLRA WLESKGKTKS IQRMDGLLSP IASKTPLSMS
401: HMKQPTSSRI SCRAKAMDQD GGKIKKMLFD SEVHVLAENI PREHRQREVN TPKKVVLASV TQCHEKHEAS LRKAVSPISS NMVPVKQQIS DNGNYPILLE
501: PQTPIETHNI VKETPGATPL ERFNVLQSNL KEALVQPYLE VLNVANKEEL QKLKGIGTKR AEYILELRED SPRPFTTLED LENIGLTSKQ IQELLKKVAA
601: TGIFK

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.