CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49096	Soybean	plastid	93.15	93.15
PGSC0003DMT400022781	Potato	cytosol	46.73	68.81
VIT_08s0032g01060.t01	Wine grape	cytosol	33.64	66.46
VIT_08s0007g00340.t01	Wine grape	plastid	64.17	62.52
VIT_09s0054g00130.t01	Wine grape	cytosol	37.85	61.52
VIT_19s0015g01710.t01	Wine grape	cytosol	34.11	61.17
VIT_03s0132g00430.t01	Wine grape	cytosol	44.7	60.42
Solyc09g010810.2.1	Tomato	cytosol	59.5	58.77
CDY62566	Canola	plastid	55.61	58.43
CDY40350	Canola	plastid	54.52	57.38
Bra009596.1-P	Field mustard	plastid	51.87	56.83
AT5G02370.1	Thale cress	cytosol	49.84	56.74
Os05t0459400-01	Rice	cytosol, plastid	51.4	56.51
Bra005719.1-P	Field mustard	cytosol	52.34	56.09
CDX80816	Canola	cytosol, plastid	52.34	55.35
CDY55558	Canola	cytosol	50.78	54.79
TraesCS1B01G293500.1	Wheat	plastid	48.6	54.17
HORVU1Hr1G072370.1	Barley	plastid	48.91	54.14
TraesCS1D01G283300.1	Wheat	plastid	48.91	53.86
EES18348	Sorghum	plastid	50.62	53.72
Zm00001d010525_P001	Maize	plastid	49.22	53.65
TraesCS1A01G284300.2	Wheat	plastid	48.6	53.61
GSMUA_Achr6P05050_001	Banana	cytosol, plastid	52.34	51.69
HORVU3Hr1G081700.1	Barley	cytosol	9.5	49.59
KRH38442	Soybean	cytosol	31.62	29.55
KRH08928	Soybean	cytosol	31.15	27.86
KRH62967	Soybean	nucleus	19.63	20.32
KRH44359	Soybean	cytosol	18.85	17.95
KRH56713	Soybean	cytosol, plastid	20.41	17.9
KRH47037	Soybean	cytosol	18.54	17.66
KRH39281	Soybean	cytosol	18.54	17.58
KRH03839	Soybean	nucleus	20.25	17.57
KRG93660	Soybean	mitochondrion	7.48	17.27
KRH09867	Soybean	cytosol	18.85	17.26
KRH23459	Soybean	cytosol	18.69	17.12
KRH48398	Soybean	cytosol	18.22	16.91
KRH02264	Soybean	cytosol	18.54	14.6
KRH50824	Soybean	cytosol	18.38	14.5
KRH12061	Soybean	cytosol	18.38	13.53
KRH37102	Soybean	cytosol	18.38	13.5

Protein Annotations

Gene3D:1.10.150.280	EntrezGene:100795452	MapMan:20.1.3.9	Gene3D:3.40.850.10	UniProt:A0A0R0F1M3	EMBL:ACUP02011349
EnsemblPlantsGene:GLYMA_18G180900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	EnsemblPlants:KRG99933	ProteinID:KRG99933	ProteinID:KRG99933.1
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PFAM:PF12836	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550
InterPro:RuvA_2-like	SMART:SM00129	SUPFAM:SSF47781	SUPFAM:SSF52540	UniParc:UPI0006ED6668	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:43493334..43499177

Molecular Weight (calculated)

70415.8 Da

IEP (calculated)

8.198

GRAVY (calculated)

-0.407

Length

642 amino acids

Sequence
(BLAST)

001: MVQHNLPLPI KSCTPKKLPN APISVSKVRV IVRVRPFLAH ETSSRNGVVS CISVLDQDFE SPQDEVTVYL KDPLTSRNEC YLLDSFFGQE DNNVGQIFCG
101: EVSPLIPGMF SGCNSTVFAY GATGSGKTYT MQGTEEQPGL MPLAMSMILS ICQRTDSTAQ ISYYEVYMDR CYDLLEVKAK EISVWDDKDG QIHLRGLSQV
201: PINTMSEFQD VFSCGVQRRK VAHTGLNDVS SRSHGVLVIS VSTLSADGTG TVACGKLNLI DLAGNEDNRR TCNEGIRLQE SAKINQSLFA LSNVIYALNN
301: NKTRVPYRES KLTRILQDSL GGTSRALMIA CLNPGEYQES VHTVSLAARS RHVSNFVPSG HKQETPKVKV DMEAKLRAWL ESKGKTKSAQ RLGPLNSPLP
401: KKTPSSIVTP AKRSITFNSS VKKWGKTANL DAQHTNERAF AVAFGNLLDV EGSFHSCMEN APSGVKDNDK KETEHDANKA ARKSYKSLPV ESLSKGVDSI
501: TIDGKDAAQS PLRKALSPIN INGNEKPLES QTPFLATCST NKGAQKNDTP LGKFSTRSST LKNCLVQEYI DFLNNASREE LLELKGIGEK MAEYIIDLRE
601: ESPLKSLNDL EKIGLSSKQA HNLFTKAAKT LFEDKAEDSI LG

Best Arabidopsis Sequence Match ( AT5G02370.1 )
(BLAST)

001: MVDSKTPAKT KLLDSSSISN VRVVLRVRPF LPREISDESC DGRSCVSVIG GDGGDTSEVA VYLKDPDSCR NESYQLDAFY GREDDNVKHI FDREVSPLIP
101: GIFHGFNATV LAYGATGSGK TFTMQGIDEL PGLMPLTMST ILSMCEKTRS RAEISYYEVY MDRCWDLLEV KDNEIAVWDD KDGQVHLKGL SSVPVKSMSE
201: FQEAYLCGVQ RRKVAHTGLN DVSSRSHGVL VISVTSQGLV TGKINLIDLA GNEDNRRTGN EGIRLQESAK INQSLFALSN VVYALNNNLP RVPYRETKLT
301: RILQDSLGGT SRALMVACLN PGEYQESLRT VSLAARSRHI SNNVSLNPKV ETPKVKIDME AKLQAWLESK GKMKSAHRMM AIRSPLMGTN QTSISQSSVK
401: KLLCHRSAIA ESAKLAGTGQ RDAFVTARNL FGVETLAASH LWEPIRNLQL ASPTKEDERD TSGEENLLVS EASLRDNTLD VEKKYTELSP LREALSPIDS
501: NAKPNSAHGS SPFLKPMTPK TPFLSTNPEI MQMEGTCQKF NAWSNNLKTS LIKEYIHFLN TANR

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G02370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.