Factsheet for VIT_16s0050g00670.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040835	Potato	plastid	43.86	46.0
KRH38442	Soybean	cytosol	46.81	43.81
KRH08928	Soybean	cytosol	47.74	42.76
Solyc03g025470.2.1	Tomato	cytosol, plastid	44.01	42.37
Bra026476.1-P	Field mustard	plastid	39.97	40.22
Bra009714.1-P	Field mustard	plastid	40.9	40.09
CDX88057	Canola	cytosol	41.68	38.23
CDX80396	Canola	cytosol, plastid	42.15	37.9
AT5G23910.2	Thale cress	cytosol	40.59	37.02
CDY16872	Canola	plastid	40.59	36.92
GSMUA_Achr4P11680_001	Banana	cytosol	36.86	36.92
CDX87151	Canola	plastid	40.44	36.78
VIT_08s0007g00340.t01	Wine grape	plastid	31.73	30.96
VIT_08s0032g01060.t01	Wine grape	cytosol	14.77	29.23
VIT_03s0132g00430.t01	Wine grape	cytosol	21.46	29.05
VIT_09s0054g00130.t01	Wine grape	cytosol	17.57	28.61
VIT_19s0015g01710.t01	Wine grape	cytosol	15.24	27.37
Os04t0375900-01	Rice	cytosol	30.48	27.0
KXG22514	Sorghum	plastid	28.93	23.48
Zm00001d038961_P002	Maize	plastid	28.62	22.69
HORVU7Hr1G000860.1	Barley	cytosol	30.02	18.45
VIT_11s0016g03960.t01	Wine grape	cytosol	18.2	17.13
VIT_00s0160g00140.t01	Wine grape	extracellular	3.42	14.97
VIT_09s0002g04480.t01	Wine grape	mitochondrion	16.49	14.78
VIT_17s0000g04330.t01	Wine grape	cytosol	16.33	13.8
VIT_05s0020g01200.t01	Wine grape	cytosol	17.42	13.74
VIT_07s0205g00140.t01	Wine grape	cytosol	16.33	13.6
VIT_10s0042g00380.t01	Wine grape	cytosol	4.35	13.59
VIT_06s0009g02690.t01	Wine grape	nucleus	1.56	5.49

Protein Annotations

Gene3D:1.10.150.280	EntrezGene:100250822	wikigene:100250822	MapMan:20.1.3.9	Gene3D:3.40.850.10	ProteinID:CBI22700
ProteinID:CBI22700.3	UniProt:E0CV00	EMBL:FN595243	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100250822	wikigene:LOC100250822	InterPro:P-loop_NTPase
PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF550	InterPro:RuvA_2-like
SMART:SM00129	SUPFAM:SSF47781	SUPFAM:SSF52540	UniParc:UPI0001BE2159	ArrayExpress:VIT_16s0050g00670	EnsemblPlantsGene:VIT_16s0050g00670
EnsemblPlants:VIT_16s0050g00670.t01	RefSeq:XP_002272003	RefSeq:XP_002272003.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:17625001..17630168

Molecular Weight (calculated)

70833.5 Da

IEP (calculated)

7.371

GRAVY (calculated)

-0.517

Length

643 amino acids

Sequence
(BLAST)

001: MASISSNYVK ADSSSWNPSR KIRIVGKIRG FTDLESQSST GFSGPWISVG KPNGEFSESV TLSFGDHPTS RKESYEIDYC YAQDEDNGLI FSREIKPMIS
101: RVCNGHTASV IAYGARGSGK TYTIQGSDEK PGLAALAMTE LLQMAGEIGK SVSISSFEVY QDHVYDLLDP KRPPAPVNSI SEFYRLYFNG FGSRKPAQKI
201: PTELPRRSHK GLMVYVSSQN SETNLVGKMN FVDLAGYEDT RKKSVDGPNL MENTKINKSL YALQNVVYAL SVNESHVPYR ESKLTRMLQD SFGGMNQILM
301: VTCLNPSFCQ DTIYSVSLAS RSYQRAFTNS TKKIKSSAKP TGLSALKNGK PTGVSSTVKK QTSSQVHFSD KKANFTDSIV KGRYVLENSM QADSSSSIAS
401: VIEPSLQEEV KSISDVSLAT VPSEEENSLS VAVTDTEPVF VEEKVSAYHD NDNHPEVTSG NSSTTLALIE EGHHIIEEKE NKSLFANGNG SPPLSARLRE
501: LSNNLKSLYS STPVCIKLPE NDTSSTNQAS ALVEPKTPAV EKKLRGNDKW EVANISSPWE ALHMHSSRMK KSLVEETLKF LNSANKEELK GLKGIGEKRS
601: TYILELRQES PEPFKSLDDL KDIGLSEKQI KGMMKKVVEE VLN

Best Arabidopsis Sequence Match ( AT5G23910.2 )
(BLAST)

001: METKMTSHGR KVVRVVARVK PSTDLASTKS ISVQKPMGDD SETVTISFGA QFAGSKDSYR LDYCYEENET TGSILTKEIK PLISTVFEGK DANVIAHGAR
101: NSGKTHLIQG NERELGLAVL TMSEMLSMAE ERGDAIFVSV YEVSQETVYD LLDQEKRVVS VLEGAQGKIQ LKGLSQVPVK SLSEFQNLYF GFKKSQKLTS
201: DLPTRSHKGV MIHVTTGNAN SGSLGRMNFL DMAGYEDSRK QNSALGPLEI ARVNKSIYAL QNVMYALNAN ESHVPYRESK LTRMLKDCLK GSNITLLITC
301: LPREFSQDSF YMLNLASRIC LGGNRAITNP TKKKINGLDR SVSLSSAAQR RQTPLTMSAA SRKQTVLRGN VTERKTKINT ATSAIKARKL FGEANDSVKC
401: KNSSKKVEGK AKMVLKKGIS TSKVVLSVQA SSPKEEICSS ITVTDFQSSL VEEEYSLAFS SSTVAMEPGY SNGASLSSEA IYTTDKETPR KQEEMFAGAT
501: HCDDAFVDKA QIVERDENNS VIEEDLTLVI DEGENLDKEN NSLLANETAS PPLSMRLQEL SNNLKSICKF SNQLSVPEKH QTPLTILQAE EASEHSDITA
601: EAAVSIELRT PEKTMPSNIG CSPWKTYSAH SSKLKNSAVG EYLKFINTAG KEDLKKLKGI GDKRAAYIVE LREESPFKTL DDLQSIGLSA KQVNGLLKKE
701: IGEIF

Arabidopsis Description

ATP binding microtubule motor family protein [Source:TAIR;Acc:AT5G23910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.