Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY70227 | Canola | cytosol | 26.37 | 16.9 |
CDY51066 | Canola | cytosol | 17.58 | 16.33 |
VIT_05s0020g01200.t01 | Wine grape | cytosol | 68.68 | 15.34 |
CDX92088 | Canola | cytosol | 50.55 | 14.86 |
KRH50824 | Soybean | cytosol | 64.29 | 14.37 |
KRH02264 | Soybean | cytosol | 63.19 | 14.11 |
Solyc01g066820.2.1 | Tomato | cytosol | 60.44 | 14.01 |
Solyc05g054260.2.1 | Tomato | nucleus | 60.44 | 13.61 |
CDY34962 | Canola | cytosol | 57.14 | 13.47 |
PGSC0003DMT400011996 | Potato | cytosol | 59.34 | 13.47 |
AT3G16630.1 | Thale cress | cytosol | 58.24 | 13.35 |
Bra021186.1-P | Field mustard | cytosol | 57.14 | 13.2 |
Solyc12g099540.1.1 | Tomato | cytosol | 57.69 | 13.09 |
Bra012755.1-P | Field mustard | cytosol | 56.59 | 12.52 |
GSMUA_Achr2P01660_001 | Banana | cytosol | 54.4 | 12.5 |
KRH37102 | Soybean | cytosol | 58.79 | 12.24 |
KRH12061 | Soybean | cytosol | 58.24 | 12.16 |
GSMUA_Achr11P... | Banana | cytosol | 52.2 | 11.59 |
CDY28354 | Canola | cytosol | 56.59 | 11.51 |
Bra022171.1-P | Field mustard | cytosol | 52.2 | 11.23 |
Os05t0154700-01 | Rice | plasma membrane | 47.8 | 10.62 |
TraesCS1A01G095000.4 | Wheat | cytosol | 46.7 | 10.55 |
TraesCS1B01G123200.1 | Wheat | cytosol | 46.7 | 10.53 |
TraesCS1D01G104200.1 | Wheat | cytosol | 46.7 | 10.53 |
EES00727 | Sorghum | cytosol, mitochondrion | 45.6 | 10.48 |
Zm00001d037599_P001 | Maize | extracellular | 46.15 | 10.45 |
CDY43118 | Canola | endoplasmic reticulum | 53.3 | 10.4 |
EES17741 | Sorghum | cytosol | 46.15 | 10.38 |
TraesCS3B01G223900.2 | Wheat | cytosol | 44.51 | 10.24 |
TraesCS3D01G197700.1 | Wheat | cytosol | 44.51 | 10.23 |
TraesCS3A01G194100.1 | Wheat | cytosol | 43.96 | 10.1 |
HORVU3Hr1G042330.10 | Barley | cytosol, plastid | 50.0 | 10.04 |
Zm00001d009840_P001 | Maize | cytosol, mitochondrion | 44.51 | 9.75 |
Zm00001d009233_P006 | Maize | cytosol, mitochondrion | 43.96 | 9.66 |
HORVU1Hr1G022250.2 | Barley | plastid | 42.31 | 8.61 |
VIT_09s0002g04480.t01 | Wine grape | mitochondrion | 32.42 | 8.23 |
VIT_11s0016g03960.t01 | Wine grape | cytosol | 19.23 | 5.12 |
VIT_00s0160g00140.t01 | Wine grape | extracellular | 2.75 | 3.4 |
VIT_17s0000g04330.t01 | Wine grape | cytosol | 11.54 | 2.76 |
PGSC0003DMT400021738 | Potato | cytosol | 8.79 | 2.43 |
CDY51069 | Canola | cytosol | 4.95 | 2.24 |
CDY34961 | Canola | cytosol | 2.2 | 2.22 |
VIT_07s0205g00140.t01 | Wine grape | cytosol | 7.69 | 1.81 |
AT4G15885.1 | Thale cress | nucleus | 1.1 | 1.77 |
CDX75887 | Canola | cytosol | 1.1 | 1.74 |
VIT_16s0050g00670.t01 | Wine grape | plastid | 5.49 | 1.56 |
VIT_08s0007g00340.t01 | Wine grape | plastid | 5.49 | 1.52 |
VIT_03s0132g00430.t01 | Wine grape | cytosol | 3.85 | 1.47 |
VIT_10s0042g00380.t01 | Wine grape | cytosol | 1.65 | 1.46 |
CDX90558 | Canola | nucleus | 1.1 | 1.02 |
CDY70641 | Canola | cytosol, nucleus, plastid | 1.1 | 0.96 |
HORVU5Hr1G080740.1 | Barley | cytosol | 0.55 | 0.87 |
VIT_09s0054g00130.t01 | Wine grape | cytosol | 1.65 | 0.76 |
VIT_08s0032g01060.t01 | Wine grape | cytosol | 1.1 | 0.62 |
VIT_19s0015g01710.t01 | Wine grape | cytosol | 1.1 | 0.56 |
Os05t0154800-01 | Rice | nucleus | 0.0 | 0.0 |
HORVU1Hr1G022270.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
ArrayExpress:VIT_06s0009g02690 | EMBL:FN595504 | EnsemblPlants:VIT_06s0009g02690.t01 | EnsemblPlantsGene:VIT_06s0009g02690 | ProteinID:CCB49090 | ProteinID:CCB49090.1 |
SEG:seg | UniParc:UPI0002109AE1 | UniProt:F6HA98 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6:-:15494204..15494753
Molecular Weight (calculated)
20483.0 Da
IEP (calculated)
7.976
GRAVY (calculated)
-0.699
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGQRQQSNV ETTGLYNHPS GETLHSASPT SDTRNAIMAR WLQSAGLQHL ASPLASTRID HRLLPDLLMQ GYGAQSAKER LFKFMRNLNF NGESSFEPYT
101: PTAQTSGVVS SEGFYPPEFR GNFRARLLDL HAMDDTELLF EHIISEPLSH WQQLETGGGH GLGVVQPHSP HPHCRHHRHR RR
101: PTAQTSGVVS SEGFYPPEFR GNFRARLLDL HAMDDTELLF EHIISEPLSH WQQLETGGGH GLGVVQPHSP HPHCRHHRHR RR
001: MGGQMQQNNA AAATALYDGA LPTNDAGDAV MARWLQSAGL QHLASPVAST GNDQRHLPNL LMQGYGAQTA EEKQRLFQLM RNLNFNGEST SESYTPTAHT
101: SAAMPSSEGF FSPEFRGDFG AGLLDLHAMD DTELLSEHVI TEPFEPSPFM PSVNKEFEED YNLAANRQQR QQTEAEPLGL LPKSDKENNS VAKIKVVVRK
201: RPLNKKETAK KEEDVVTVSD NSLTVHEPRV KVDLTAYVEK HEFCFDAVLD EDVSNDEVYR ATIEPIIPII FQRTKATCFA YGQTGSGKTF TMKPLPIRAV
301: EDLMRLLRQP VYSNQRFKLW LSYFEIYGGK LFDLLSERKK LCMREDGRQQ VCIVGLQEYE VSDVQIVKDF IEKGNAERST GSTGANEESS RSHAILQLVV
401: KKHVEVKDTR RRNNDSNELP GKVVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQLHIPFRG SKLTEVLRDS FVGNSRTVMI
501: SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NSKKDQTANS MPPVNKDPLL GPNDVEDVFE PPQEVNVPET RRRVVEKDSN SSTSGIDFRQ PTNYREESGI
601: PSFSMDKGRS EPNSSFAGST SQRNNISSYP QETSDREEKV KKVSPPRGKG LREEKPDRPQ NWSKRDVSSS DIPTLTNFRQ NASETASRQY ETASRQYETD
701: PSLDENLDAL LEEEEALIAA HRKEIEDTME IVREEMKLLA EVDQPGSMIE NYVTQLSFVL SRKAAGLVSL QARLARFQHR LKEQEILSRK RVPR
101: SAAMPSSEGF FSPEFRGDFG AGLLDLHAMD DTELLSEHVI TEPFEPSPFM PSVNKEFEED YNLAANRQQR QQTEAEPLGL LPKSDKENNS VAKIKVVVRK
201: RPLNKKETAK KEEDVVTVSD NSLTVHEPRV KVDLTAYVEK HEFCFDAVLD EDVSNDEVYR ATIEPIIPII FQRTKATCFA YGQTGSGKTF TMKPLPIRAV
301: EDLMRLLRQP VYSNQRFKLW LSYFEIYGGK LFDLLSERKK LCMREDGRQQ VCIVGLQEYE VSDVQIVKDF IEKGNAERST GSTGANEESS RSHAILQLVV
401: KKHVEVKDTR RRNNDSNELP GKVVGKISFI DLAGSERGAD TTDNDRQTRI EGAEINKSLL ALKECIRALD NDQLHIPFRG SKLTEVLRDS FVGNSRTVMI
501: SCISPNAGSC EHTLNTLRYA DRVKSLSKSG NSKKDQTANS MPPVNKDPLL GPNDVEDVFE PPQEVNVPET RRRVVEKDSN SSTSGIDFRQ PTNYREESGI
601: PSFSMDKGRS EPNSSFAGST SQRNNISSYP QETSDREEKV KKVSPPRGKG LREEKPDRPQ NWSKRDVSSS DIPTLTNFRQ NASETASRQY ETASRQYETD
701: PSLDENLDAL LEEEEALIAA HRKEIEDTME IVREEMKLLA EVDQPGSMIE NYVTQLSFVL SRKAAGLVSL QARLARFQHR LKEQEILSRK RVPR
Arabidopsis Description
KIN13AKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VP70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.