Factsheet for VIT_11s0016g03960.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39281	Soybean	cytosol	73.5	74.15
KRH48398	Soybean	cytosol	73.65	72.69
VIT_09s0002g04480.t01	Wine grape	mitochondrion	72.77	69.32
KRG93660	Soybean	mitochondrion	27.38	67.27
GSMUA_Achr8P15940_001	Banana	cytosol	68.23	66.95
GSMUA_Achr7P14340_001	Banana	cytosol	62.08	66.56
Zm00001d011405_P001	Maize	cytosol	62.08	62.17
TraesCS3A01G229100.1	Wheat	cytosol	63.69	61.97
Zm00001d044170_P001	Maize	cytosol	63.54	61.82
TraesCS3D01G227300.1	Wheat	cytosol	63.54	61.82
EES01102	Sorghum	cytosol	63.25	61.8
TraesCS3B01G255500.1	Wheat	cytosol	63.25	61.54
Os01t0625200-01	Rice	cytosol	25.04	55.34
VIT_05s0020g01200.t01	Wine grape	cytosol	53.29	44.66
VIT_00s0160g00140.t01	Wine grape	extracellular	7.91	36.73
VIT_10s0042g00380.t01	Wine grape	cytosol	10.1	33.5
VIT_17s0000g04330.t01	Wine grape	cytosol	23.87	21.42
VIT_08s0032g01060.t01	Wine grape	cytosol	9.66	20.31
VIT_03s0132g00430.t01	Wine grape	cytosol	13.91	20.0
VIT_19s0015g01710.t01	Wine grape	cytosol	10.1	19.27
VIT_06s0009g02690.t01	Wine grape	nucleus	5.12	19.23
VIT_09s0054g00130.t01	Wine grape	cytosol	10.98	18.99
VIT_08s0007g00340.t01	Wine grape	plastid	18.16	18.82
VIT_07s0205g00140.t01	Wine grape	cytosol	20.64	18.26
VIT_16s0050g00670.t01	Wine grape	plastid	17.13	18.2

Protein Annotations

MapMan:13.3.3.3	MapMan:20.1.3.11	Gene3D:3.40.850.10	ProteinID:CCB51518	ProteinID:CCB51518.1	ncoils:Coil
UniProt:F6HH22	EMBL:FN595756	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF743	SMART:SM00129
SUPFAM:SSF52540	UniParc:UPI00021087A7	ArrayExpress:VIT_11s0016g03960	EnsemblPlantsGene:VIT_11s0016g03960	EnsemblPlants:VIT_11s0016g03960.t01	SEG:seg

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:F6HH22]

Coordinates

chr11:-:3236395..3243211

Molecular Weight (calculated)

76686.2 Da

IEP (calculated)

5.989

GRAVY (calculated)

-0.653

Length

683 amino acids

Sequence
(BLAST)

001: MGRGVQRSAS ELGSDPSTPP LSSRSSSLRK NADDVLSPGL LDLHSFDTEL LPEIPVPGLY DGPSFRQHVY GKSFDDSEPY LTNNKLANKA RGLSDNNLLK
101: SFSVDKEKAS NVAKIKVVVR KRPLNKREMS KKEEDIISIV PNSNYLTVHE TKLKVDLTEY VEKHEFVFDA VLNEDVSNNE VYSETVEPIV PIIFQRTKAT
201: CFAYGQTGSG KTYTMQPLPL KASEDILRLM HNTYRNQGFQ LFVSFFEIYG GKLFDLLNDR RKLCMREDGK QQVCIVGLQE YRVSNVETIK DFIEKGNATR
301: STGTTGANEE SSRSHAILQL AIKRSADGSE SKPARLVGKL SFIDLAGSER GADTTDNDKQ TRMEGAEINK SLLALKECIR ALDNDQGHIP FRGSKLTEVL
401: RDSFVGDSRT VMISCISPSS GSCEHTLNTL RYADRVKSLS KGNISKKDPL SSSLNLRDST AFPVSSLLPT ASNIEDNLPD IPNEINRFGW SKQIEKETSP
501: PFKVDRVPSG RVEGNIPASS YSDYYKGQRG GQSDVTEDDV DYSEEIYNQE KPSWIKNKKV ETSQISALED KMRKPESHIK RRELPDFEAN NLRPDDDLNA
601: LLKEEEDLVN AHRRQVEETM DIVREEMNLL VEADQPGNQL DDYVSRLNTI LSQKAAGIMQ LQTRLAHFQR RLHDYNVLVS SGH

Best Arabidopsis Sequence Match ( AT3G16060.1 )
(BLAST)

001: MSGRQRSVAA AVHHQRQLSD NPLDMSSSNG RWLQSTGLQH FQSSANDYGY YAGGQGGGGQ AARGYQNAQR GNEFFGEPTT PQYGARPTNQ RKNNDESEFS
101: PGLLDLHSFD TELLPEIPVS NQLDGPSLFN PSQGQSFDDF EAYNKQPNRS RVLAENLAAE KERMNAVAKI KVVVRKRPLN KKESTKNEED IVDTHANCLT
201: VHETKLKVDL TAYVEKHEFV FDAVLDEEVS NDEVYRETVE PVVPLIFQRI KATCFAYGQT GSGKTYTMKP LPLKASRDIL RLMHHTYRNQ GFQLFVSFFE
301: IYGGKLYDLL SERKKLCMRE DGKQQVCIVG LQEYRVSDTD AIMELIERGS ATRSTGTTGA NEESSRSHAI LQLAIKKSVE GNQSKPPRLV GKLSFIDLAG
401: SERGADTTDN DKQTRLEGAE INKSLLALKE CIRALDNDQG HIPFRGSKLT EVLRDSFMGN SRTVMISCIS PSSGSCEHTL NTLRYADRVK SLSKGNASKK
501: DVSSSTMNLR ESTKIPLSSA LPTPSNFDDD VNEMWTEEND EFDASDYEQD KQMWKKNGKL EPSYNGMAQE RIPKPTIQMK SRDMPRPDMK KSNSDDNLNA
601: LLQEEEDLVN AHRKQVEDTM NIVKEEMNLL VEADQPGNQL DGYISRLNTI LSQKAAGILQ LQNRLAHFQK RLREHNVLVS TTGY

Arabidopsis Description

KIN13BKinesin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V575]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.